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Protein

Dynamin-related protein 5A

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Microtubule-associated force-producing protein.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi41 – 48GTPBy similarity8
Nucleotide bindingi142 – 146GTPBy similarity5
Nucleotide bindingi211 – 214GTPBy similarity4

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Motor protein

Keywords - Biological processi

Cell cycle, Cell division

Keywords - Ligandi

GTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Dynamin-related protein 5A
Alternative name(s):
Soybean dynamin-like protein 5A
Short name:
SDL5A
OrganismiGlycine max (Soybean) (Glycine hispida)
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
Proteomesi
  • UP000008827 Componenti: Chromosome 8

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Cytoskeleton, Microtubule

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003345851 – 610Dynamin-related protein 5AAdd BLAST610

Proteomic databases

PRIDEiQ39828.

Expressioni

Gene expression databases

GenevisibleiQ39828. GM.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi3847.GLYMA08G02700.1.

Structurei

3D structure databases

ProteinModelPortaliQ39828.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 300Dynamin-type GAdd BLAST270
Domaini518 – 610GEDPROSITE-ProRule annotationAdd BLAST93

Sequence similaritiesi

Contains 1 GED domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0446. Eukaryota.
COG0699. LUCA.
InParanoidiQ39828.
OMAiIMEICRC.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR000375. Dynamin_central.
IPR001401. Dynamin_GTPase.
IPR019762. Dynamin_GTPase_CS.
IPR022812. Dynamin_SF.
IPR030381. G_DYNAMIN_dom.
IPR003130. GED.
IPR020850. GED_dom.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR11566. PTHR11566. 1 hit.
PfamiPF01031. Dynamin_M. 1 hit.
PF00350. Dynamin_N. 1 hit.
PF02212. GED. 1 hit.
[Graphical view]
PRINTSiPR00195. DYNAMIN.
SMARTiSM00053. DYNc. 1 hit.
SM00302. GED. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00410. G_DYNAMIN_1. 1 hit.
PS51718. G_DYNAMIN_2. 1 hit.
PS51388. GED. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q39828-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENLISLVNK IQRACTALGD HGENSALPTL WDSLPAIAVV GGQSSGKSSV
60 70 80 90 100
LESVVGKDFL PRGSGIVTRR PLVLQLHKIE EGSREYAEFL HLPRKRFTDF
110 120 130 140 150
VAVRKEIQDE TDRETGRTKQ ISTVPIHLSI YSPNVVNLTL VDLPGLTKVA
160 170 180 190 200
VEGQPDSIVK DIEDMVRSYI EKPNCIILAI SPANQDLATS DAIKISREVD
210 220 230 240 250
PTGDRTIGVL TKIDLMDKGT DAVDILEGRA YRLKFPWIGV VNRSQQDINK
260 270 280 290 300
NVDMIAARRR EREYFNSTPE YKHLANRMGS EHLAKMLSKH LETVIKSKIP
310 320 330 340 350
GIQSLINKTI AELEAELTRL GKPVAADAGG KLYAIMEICR SFDQIFKDHL
360 370 380 390 400
DGVRPGGDKI YNVFDNQLPA ALKRLQFDKQ LSMENIRKLI TEADGYQPHL
410 420 430 440 450
IAPEQGYRRL IESSLITIRG PAEAAVDAVH SLLKDLVHKA ISETLDLKQY
460 470 480 490 500
PGLRVEVGAA AVDSLERMRD ESKRATLQLV DMECGYLTVD FFRKLPQDVD
510 520 530 540 550
KGGNPTHSIF DRYNDSYLRR IGTTILSYVN MVCATLRNSI PKSIVYCQVR
560 570 580 590 600
EAKRSLLDHF FTELGKMETK RLSSLLNEDP AIMERRSALA KRLELYRSAQ
610
AEIDAVAWSK
Length:610
Mass (Da):68,329
Last modified:November 1, 1996 - v1
Checksum:i36EA3262FEC16D27
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36430 mRNA. Translation: AAC49183.1.
PIRiS63668.
RefSeqiNP_001236182.1. NM_001249253.1.
UniGeneiGma.28785.

Genome annotation databases

EnsemblPlantsiGLYMA08G02700.1; GLYMA08G02700.1; GLYMA08G02700.
GeneIDi100037461.
GrameneiGLYMA08G02700.1; GLYMA08G02700.1; GLYMA08G02700.
KEGGigmx:100037461.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36430 mRNA. Translation: AAC49183.1.
PIRiS63668.
RefSeqiNP_001236182.1. NM_001249253.1.
UniGeneiGma.28785.

3D structure databases

ProteinModelPortaliQ39828.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3847.GLYMA08G02700.1.

Proteomic databases

PRIDEiQ39828.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGLYMA08G02700.1; GLYMA08G02700.1; GLYMA08G02700.
GeneIDi100037461.
GrameneiGLYMA08G02700.1; GLYMA08G02700.1; GLYMA08G02700.
KEGGigmx:100037461.

Phylogenomic databases

eggNOGiKOG0446. Eukaryota.
COG0699. LUCA.
InParanoidiQ39828.
OMAiIMEICRC.

Gene expression databases

GenevisibleiQ39828. GM.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR000375. Dynamin_central.
IPR001401. Dynamin_GTPase.
IPR019762. Dynamin_GTPase_CS.
IPR022812. Dynamin_SF.
IPR030381. G_DYNAMIN_dom.
IPR003130. GED.
IPR020850. GED_dom.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR11566. PTHR11566. 1 hit.
PfamiPF01031. Dynamin_M. 1 hit.
PF00350. Dynamin_N. 1 hit.
PF02212. GED. 1 hit.
[Graphical view]
PRINTSiPR00195. DYNAMIN.
SMARTiSM00053. DYNc. 1 hit.
SM00302. GED. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00410. G_DYNAMIN_1. 1 hit.
PS51718. G_DYNAMIN_2. 1 hit.
PS51388. GED. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSDL5A_SOYBN
AccessioniPrimary (citable) accession number: Q39828
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: November 1, 1996
Last modified: November 2, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.