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Q39827

- SPE1_SOYBN

UniProt

Q39827 - SPE1_SOYBN

Protein

Arginine decarboxylase

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 82 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-arginine = agmatine + CO2.

    Cofactori

    Pyridoxal phosphate.
    Magnesium.

    Pathwayi

    GO - Molecular functioni

    1. arginine decarboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginine catabolic process Source: InterPro
    2. putrescine biosynthetic process Source: UniProtKB-KW
    3. spermidine biosynthetic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    Decarboxylase, Lyase

    Keywords - Biological processi

    Putrescine biosynthesis, Spermidine biosynthesis

    Keywords - Ligandi

    Magnesium, Pyridoxal phosphate

    Enzyme and pathway databases

    BRENDAi4.1.1.19. 2483.
    SABIO-RKQ39827.
    UniPathwayiUPA00186; UER00284.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine decarboxylase (EC:4.1.1.19)
    Short name:
    ADC
    Short name:
    ARGDC
    OrganismiGlycine max (Soybean) (Glycine hispida)
    Taxonomic identifieri3847 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
    ProteomesiUP000008827: Unplaced

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 692692Arginine decarboxylasePRO_0000149954Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei153 – 1531N6-(pyridoxal phosphate)lysineBy similarity

    Expressioni

    Gene expression databases

    GenevestigatoriQ39827.

    Structurei

    3D structure databases

    ProteinModelPortaliQ39827.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni337 – 34711Substrate-bindingBy similarityAdd
    BLAST

    Sequence similaritiesi

    Phylogenomic databases

    KOiK01583.

    Family and domain databases

    Gene3Di2.40.37.10. 2 hits.
    3.20.20.10. 1 hit.
    InterProiIPR009006. Ala_racemase/Decarboxylase_C.
    IPR002985. Arg_decrbxlase.
    IPR022643. De-COase2_C.
    IPR022657. De-COase2_CS.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001336. Arg_decrbxlase. 1 hit.
    PRINTSiPR01180. ARGDCRBXLASE.
    PR01179. ODADCRBXLASE.
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsiTIGR01273. speA. 1 hit.
    PROSITEiPS00878. ODR_DC_2_1. 1 hit.
    PS00879. ODR_DC_2_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q39827-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPVLACCVDA AAPPGYAFAG DISFPAPIAF TGVPPATADD TNNSNNHWSP    50
    SLSAALYNVD GWGGPYFAVN TAGNISVRPH GSDTVSHQEI DLLKIVKKAS 100
    DPKSLGGLSL QLPLIARFPD VLKNRLESLQ SAFDYAIQSG GYESHYQGVY 150
    PVKCNQDRFV VEDIVKFGSP FRFGLEAGSK PELLLAMSCL CKGNPDGLLI 200
    CNGFKDAEYI SLALVANKLA LNTVIVVEQE EEVDLIVELS KKLCIKPVIG 250
    LRAKLRTKHS GHFGGIFRRR GKFGLTTARV LRVVKNLDLA GMLDCLQLLH 300
    FHIGSQIPST ALLADGVGEA AQIYCELVRL GANMRVIDIG GGLGIDYDGS 350
    KSCDSDISVE YGLEEYAAAV VHAVQCVCDR SVKHPVICSE SGRAIVSHHS 400
    VLIFEAVGTS STNGGGAPPA LSAHYLAEEL SEDYGYLSEL AFRGDYETCL 450
    VYTEEMKERC VEQFKQGTVC MEQLAAVEGL CELVRKAVGA AESVRRYHVN 500
    LSIFTSVPDA WGIEQVFPII PIHRLDEKPS VRGILSDLTC DSDGKIDKFI 550
    NGESSLPLHE MEGGRTYYLG MFLGGAYEEA LGGVHNLFGG PSVVRVSQSD 600
    GPHSFAVTRA VPGPSCGDVL RVMQHQPELM FETLKHRAQE YVSHDNAAAL 650
    LAAGLARTFD RMPYLLSLSS FVADDVAAAV PAAQDLGEQW SY 692
    Length:692
    Mass (Da):74,595
    Last modified:November 1, 1996 - v1
    Checksum:i31BA9C207B5A6EF3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U35367 mRNA. Translation: AAD09204.1.
    PIRiT06593.
    RefSeqiNP_001238359.1. NM_001251430.1.
    UniGeneiGma.18066.

    Genome annotation databases

    GeneIDi548071.
    KEGGigmx:548071.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U35367 mRNA. Translation: AAD09204.1 .
    PIRi T06593.
    RefSeqi NP_001238359.1. NM_001251430.1.
    UniGenei Gma.18066.

    3D structure databases

    ProteinModelPortali Q39827.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 548071.
    KEGGi gmx:548071.

    Phylogenomic databases

    KOi K01583.

    Enzyme and pathway databases

    UniPathwayi UPA00186 ; UER00284 .
    BRENDAi 4.1.1.19. 2483.
    SABIO-RK Q39827.

    Gene expression databases

    Genevestigatori Q39827.

    Family and domain databases

    Gene3Di 2.40.37.10. 2 hits.
    3.20.20.10. 1 hit.
    InterProi IPR009006. Ala_racemase/Decarboxylase_C.
    IPR002985. Arg_decrbxlase.
    IPR022643. De-COase2_C.
    IPR022657. De-COase2_CS.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001336. Arg_decrbxlase. 1 hit.
    PRINTSi PR01180. ARGDCRBXLASE.
    PR01179. ODADCRBXLASE.
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsi TIGR01273. speA. 1 hit.
    PROSITEi PS00878. ODR_DC_2_1. 1 hit.
    PS00879. ODR_DC_2_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A cDNA encoding an arginine decarboxylase from soybean hypocotyls."
      Nam K.H., Lee S.H., Lee J.H.
      Plant Gene Register PGR95-142
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].

    Entry informationi

    Entry nameiSPE1_SOYBN
    AccessioniPrimary (citable) accession number: Q39827
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 1998
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 82 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3