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Protein
Submitted name:

Ascorbate peroxidase

Gene

gAPX

Organism
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • heme binding Source: InterPro
  • L-ascorbate peroxidase activity Source: AgBase
  • protein homodimerization activity Source: AgBase

GO - Biological processi

  • hydrogen peroxide catabolic process Source: AgBase
  • response to ethylene Source: AgBase
  • response to hydrogen peroxide Source: AgBase
  • seed trichome elongation Source: AgBase
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase, PeroxidaseImported

Enzyme and pathway databases

BRENDAi1.11.1.11. 2499.

Protein family/group databases

PeroxiBasei1955. GhAPx01.

Names & Taxonomyi

Protein namesi
Submitted name:
Ascorbate peroxidaseImported
Submitted name:
Glyoxysomal ascorbate peroxidaseImported
Gene namesi
Name:gAPXImported
OrganismiGossypium hirsutum (Upland cotton) (Gossypium mexicanum)Imported
Taxonomic identifieri3635 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeMalvoideaeGossypium

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei260 – 281HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

  • glyoxysomal membrane Source: AgBase
  • integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

GO - Molecular functioni

  • protein homodimerization activity Source: AgBase

Structurei

3D structure databases

ProteinModelPortaliQ39780.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini89 – 288PEROXIDASE_4InterPro annotationAdd BLAST200

Sequence similaritiesi

Belongs to the peroxidase family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiIPR002207. Asc_peroxidase.
IPR010255. Haem_peroxidase.
IPR002016. Haem_peroxidase_pln/fun/bac.
IPR019794. Peroxidases_AS.
IPR019793. Peroxidases_heam-ligand_BS.
[Graphical view]
PfamiPF00141. peroxidase. 1 hit.
[Graphical view]
PRINTSiPR00459. ASPEROXIDASE.
PR00458. PEROXIDASE.
SUPFAMiSSF48113. SSF48113. 1 hit.
PROSITEiPS00435. PEROXIDASE_1. 1 hit.
PS00436. PEROXIDASE_2. 1 hit.
PS50873. PEROXIDASE_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q39780-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFPVVDTEY LKEIDKARRD LRALIALKNC APIMLRLAWH DAGTYDVSTK
60 70 80 90 100
TGGPNGSIRN EEEFTHGANS GLKIAIDFCE EVKAKHPKIT YADLYQLAGV
110 120 130 140 150
VAVEVTGGPT IDFVPGRKDS NICPREGRLP DAKRGAPHLR DIFYRMGLSD
160 170 180 190 200
KDIVALSGGH TLGRAHPERS GFDGPWTNEP LKFDNSYFLE LLKGESEGLL
210 220 230 240 250
KLPTDKALLD DPEFRKYVEL YAKDEDAFFR DYAESHKKLS ELGFTPTSAR
260 270 280
SKVMVKDSTV LAQGAVGVAV AAAVVILSYF YEVRKRMK
Length:288
Mass (Da):31,942
Last modified:November 1, 1996 - v1
Checksum:iADF15C705ED54C4E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U37060 mRNA. Translation: AAB52954.1.
EU244478 mRNA. Translation: ACT56519.1.
PIRiT09845.
RefSeqiNP_001314208.1. NM_001327279.1.
UniGeneiGhi.16325.

Genome annotation databases

GeneIDi107927982.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U37060 mRNA. Translation: AAB52954.1.
EU244478 mRNA. Translation: ACT56519.1.
PIRiT09845.
RefSeqiNP_001314208.1. NM_001327279.1.
UniGeneiGhi.16325.

3D structure databases

ProteinModelPortaliQ39780.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

PeroxiBasei1955. GhAPx01.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi107927982.

Enzyme and pathway databases

BRENDAi1.11.1.11. 2499.

Family and domain databases

InterProiIPR002207. Asc_peroxidase.
IPR010255. Haem_peroxidase.
IPR002016. Haem_peroxidase_pln/fun/bac.
IPR019794. Peroxidases_AS.
IPR019793. Peroxidases_heam-ligand_BS.
[Graphical view]
PfamiPF00141. peroxidase. 1 hit.
[Graphical view]
PRINTSiPR00459. ASPEROXIDASE.
PR00458. PEROXIDASE.
SUPFAMiSSF48113. SSF48113. 1 hit.
PROSITEiPS00435. PEROXIDASE_1. 1 hit.
PS00436. PEROXIDASE_2. 1 hit.
PS50873. PEROXIDASE_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ39780_GOSHI
AccessioniPrimary (citable) accession number: Q39780
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 2, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.