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Protein
Submitted name:

Ginnacin

Gene
N/A
Organism
Ginkgo biloba (Ginkgo) (Maidenhair tree)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
GinnacinImported
OrganismiGinkgo biloba (Ginkgo) (Maidenhair tree)Imported
Taxonomic identifieri3311 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaGinkgoidaeGinkgoalesGinkgoaceaeGinkgo

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Sequence analysisAdd
BLAST
Chaini26 – 460435Sequence analysisPRO_5004222559Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ39772.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini47 – 236190Cupin_1InterPro annotationAdd
BLAST
Domaini286 – 434149Cupin_1InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.120.10. 2 hits.
InterProiIPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.

Sequencei

Sequence statusi: Complete.

Q39772-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKQTTLLIL LVCLLFSIQC FTSNAREAEV ERRQREQLQQ SCRFDRLNAQ
60 70 80 90 100
EPTQRITSEG GSVELLNVED SEQFQCAGVA PLRETLNPNA LSLPRYTNTP
110 120 130 140 150
TMAYVVEGEG RLGVVFPGCP ETFQSSTSRG GEGQQSQERS QKIRRVRRGD
160 170 180 190 200
VVAIPAGVAY WLYNDGNRRL QIVAIADTSN DQNQLDQTYR PFYLAGSAPS
210 220 230 240 250
GAQKAAGATS IGDNILQGFD TDTLAEAMGI SQDTARRIQQ NQKKGLIVKV
260 270 280 290 300
ERGLRMPGPP SDDYERERER EGNNVEELYC SMRLRHNADD SEDADVYVRN
310 320 330 340 350
GGRLNTVNRL KLPALRSLRL GAERGILQPN AMFAPSWLNA HASHVRDERA
360 370 380 390 400
GQNPNRPKRR QESVDGAVKE GQFLVIPQLH AIAKQAGKDG LEWISFTTSD
410 420 430 440 450
SPIRSTLTGR NSVLKAMPQE VVMNAYRINE KDARDLRRNR EHETIILSPT
460
PQHQQPRAIE
Length:460
Mass (Da):51,476
Last modified:November 1, 1996 - v1
Checksum:i062F36A3BE779897
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X75426 mRNA. Translation: CAA53177.1.
PIRiS47964.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X75426 mRNA. Translation: CAA53177.1.
PIRiS47964.

3D structure databases

ProteinModelPortaliQ39772.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.10. 2 hits.
InterProiIPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ39772_GINBI
AccessioniPrimary (citable) accession number: Q39772
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: December 9, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.