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Protein
Submitted name:

Chloroplast RNA polymerase sigma subunit

Gene

sigA

Organism
Cyanidium caldarium (Red alga)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Chloroplast RNA polymerase sigma subunitImported
Gene namesi
Name:sigAImported
OrganismiCyanidium caldarium (Red alga)Imported
Taxonomic identifieri2771 [NCBI]
Taxonomic lineageiEukaryotaRhodophytaBangiophyceaeCyanidialesCyanidiaceaeCyanidium

Structurei

3D structure databases

ProteinModelPortaliQ39515
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini380 – 393RNA_pol_sigma70InterPro annotationAdd BLAST14
Domaini549 – 575RNA_pol_sigma70InterPro annotationAdd BLAST27

Family and domain databases

Gene3Di1.10.10.10, 2 hits
InterProiView protein in InterPro
IPR014284 RNA_pol_sigma-70_dom
IPR000943 RNA_pol_sigma70
IPR009042 RNA_pol_sigma70_r1_2
IPR007627 RNA_pol_sigma70_r2
IPR007624 RNA_pol_sigma70_r3
IPR007630 RNA_pol_sigma70_r4
IPR013325 RNA_pol_sigma_r2
IPR013324 RNA_pol_sigma_r3/r4-like
IPR016262 RNA_pol_sigma_SigB/C/D/F
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF00140 Sigma70_r1_2, 1 hit
PF04542 Sigma70_r2, 1 hit
PF04539 Sigma70_r3, 1 hit
PF04545 Sigma70_r4, 1 hit
PIRSFiPIRSF000767 RNA_pol_sigma_SigB/C/D, 1 hit
PRINTSiPR00046 SIGMA70FCT
SUPFAMiSSF88659 SSF88659, 2 hits
SSF88946 SSF88946, 1 hit
TIGRFAMsiTIGR02937 sigma70-ECF, 1 hit
PROSITEiView protein in PROSITE
PS00715 SIGMA70_1, 1 hit
PS00716 SIGMA70_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q39515-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVDYQPRSA YMIAAGSRRT QTHKCGTFEK LQEPGDPDSV LTGIILRSSE
60 70 80 90 100
GAHQERSDAS GLDIIIGTWS PSHRTSALVD PRGLAAYADE LLAAADIDIA
110 120 130 140 150
SLTEEGGLAP QNSANQPSRI SFPGSLGAYV RGLEQQYRSE RMIDRAPSAT
160 170 180 190 200
EIESRKSKKA ALKSQNKMTS SRKETRSSSS QARARQQKGR KSEQAPGVPV
210 220 230 240 250
HMRAGPRTKN TVTVRDPFAD NQSANDGSTV PVEEVYSNSE TEEAESQIES
260 270 280 290 300
DELLDFIVEE VDPADVDLST VEAKDDTIRS YLREIGRYQL LHPGEEIELS
310 320 330 340 350
KQVCILMDLE QFQRSFREEH GKSPTESEWA QGCGYGDDVE KLREHIRDGR
360 370 380 390 400
KAKERMVTAN LRLVVSIAKR YSNRGVALQD LIQEGSIGLI RGVEKFDAER
410 420 430 440 450
GFRFSTYATW WIRQSITRAI SDSSRSIRLP VHVHDTISLI RKQTKALQVE
460 470 480 490 500
LGRPPSEEEI CESVGIDRAK YRLVMECSRN IVSLETPLRS GDDVHFLGES
510 520 530 540 550
LIAPEERAEE NCSRDTLRES IEKVLHCLST REREVIRMRF GLTDGRPRTL
560 570 580 590
EEVGSRFNVT RERIRQIESK ALKKLRTPAE NNFLDEYLGE V
Length:591
Mass (Da):66,381
Last modified:November 1, 1996 - v1
Checksum:iE464D21D5E2C8B2B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D83179 Genomic DNA Translation: BAA11832.1
PIRiT14364

Similar proteinsi

Entry informationi

Entry nameiQ39515_CYACA
AccessioniPrimary (citable) accession number: Q39515
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 25, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health