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Protein
Submitted name:

AGL15 type 2

Gene
N/A
Organism
Brassica napus (Rape)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AGL15 type 2Imported
OrganismiBrassica napus (Rape)Imported
Taxonomic identifieri3708 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiQ39296 baseline

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliQ39296
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61
Domaini88 – 178K-boxInterPro annotationAdd BLAST91

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili88 – 115Sequence analysisAdd BLAST28
Coiled coili146 – 178Sequence analysisAdd BLAST33

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR033896 MADS_MEF2-like
IPR002487 TF_Kbox
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF01486 K-box, 1 hit
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS51297 K_BOX, 1 hit
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q39296-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRGKIEIKR IENANSRQVT FSKRRAGLLK KAHELSVLCD SEVAVIVFSK
60 70 80 90 100
SGKLFEFSST GMKRTVLRYE NYQRSSDAPL IKYKPENQEE DCTEVDFLKN
110 120 130 140 150
EISKLQEKHL QMQGKGLNAL CLKELQHLEQ QLNVSLISVR ERKELLLTKQ
160 170 180 190 200
IEESRIREQR AELENETLRR QVQELRNFLP SINQNYVPSY ITCFAIDPKN
210 220 230 240 250
SPVNNSGLDD TNYSLQKTNS DTTLQLGLPG EAQARRRSEA NRESPSSDSV
260
TTSTTKATPQ RINLV
Length:265
Mass (Da):30,332
Last modified:November 1, 1996 - v1
Checksum:i2E54ADE308BD294A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U22681 mRNA Translation: AAB03807.1
PIRiT07869

Similar proteinsi

Entry informationi

Entry nameiQ39296_BRANA
AccessioniPrimary (citable) accession number: Q39296
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health