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Protein
Submitted name:

Pathogenesis-related protein 1

Gene

PR1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Pathogenesis-related protein 1Imported
Submitted name:
Pathogenesis-related protein 1, 18.9KImported
Submitted name:
Putative pathogenesis-related proteinImported
Submitted name:
Putative pathogenesis-related protein 1, 18.9KImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:PR1Imported
Synonyms:T16L1.200Imported
Ordered Locus Names:At4g33710Imported
ORF Names:AXX17_AT4G38550Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G33710.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727Sequence analysisAdd
BLAST
Chaini28 – 166139Sequence analysisPRO_5007923489Add
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini29 – 162134SCPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the CRISP family.SAAS annotation
Contains SCP domain.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
HOGENOMiHOG000036879.
OMAiNALMRMA.
OrthoDBiEOG09360NFY.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiIPR001283. Allrgn_V5/Tpx1.
IPR018244. Allrgn_V5/Tpx1_CS.
IPR014044. CAP_domain.
[Graphical view]
PANTHERiPTHR10334. PTHR10334. 1 hit.
PfamiPF00188. CAP. 1 hit.
[Graphical view]
PRINTSiPR00837. V5TPXLIKE.
SMARTiSM00198. SCP. 1 hit.
[Graphical view]
SUPFAMiSSF55797. SSF55797. 1 hit.
PROSITEiPS01009. CRISP_1. 1 hit.
PS01010. CRISP_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q39187-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKMFISPQTL VLLALALVLA FAVPLKAQDR RQDYLDVHNH ARDDVSVPHI
60 70 80 90 100
KWHAGAARYA WNYAQRRKRD CRLIHSNSRG RYGENLAWSS GDMSGAAAVR
110 120 130 140 150
LWVREKSDYF HKSNTCRAGK QCGHYTQVVW KNSEWVGCAK VKCDNGGTFV
160
TCNYSHPGNV RGRRPY
Length:166
Mass (Da):18,953
Last modified:November 1, 1996 - v1
Checksum:iA32EEF66245CDC5B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY070411 mRNA. Translation: AAL49907.1.
AY096590 mRNA. Translation: AAM20240.1.
CP002687 Genomic DNA. Translation: AEE86268.1.
AL031394 Genomic DNA. Translation: CAA20584.1.
X96600 Genomic DNA. Translation: CAA65419.1.
AL161584 Genomic DNA. Translation: CAB80088.1.
LUHQ01000004 Genomic DNA. Translation: OAO99429.1.
PIRiS71270.
RefSeqiNP_195097.1. NM_119529.2.
UniGeneiAt.28363.

Genome annotation databases

EnsemblPlantsiAT4G33710.1; AT4G33710.1; AT4G33710.
GeneIDi829513.
GrameneiAT4G33710.1; AT4G33710.1; AT4G33710.
KEGGiath:AT4G33710.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY070411 mRNA. Translation: AAL49907.1.
AY096590 mRNA. Translation: AAM20240.1.
CP002687 Genomic DNA. Translation: AEE86268.1.
AL031394 Genomic DNA. Translation: CAA20584.1.
X96600 Genomic DNA. Translation: CAA65419.1.
AL161584 Genomic DNA. Translation: CAB80088.1.
LUHQ01000004 Genomic DNA. Translation: OAO99429.1.
PIRiS71270.
RefSeqiNP_195097.1. NM_119529.2.
UniGeneiAt.28363.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G33710.1; AT4G33710.1; AT4G33710.
GeneIDi829513.
GrameneiAT4G33710.1; AT4G33710.1; AT4G33710.
KEGGiath:AT4G33710.

Organism-specific databases

TAIRiAT4G33710.

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
HOGENOMiHOG000036879.
OMAiNALMRMA.
OrthoDBiEOG09360NFY.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiIPR001283. Allrgn_V5/Tpx1.
IPR018244. Allrgn_V5/Tpx1_CS.
IPR014044. CAP_domain.
[Graphical view]
PANTHERiPTHR10334. PTHR10334. 1 hit.
PfamiPF00188. CAP. 1 hit.
[Graphical view]
PRINTSiPR00837. V5TPXLIKE.
SMARTiSM00198. SCP. 1 hit.
[Graphical view]
SUPFAMiSSF55797. SSF55797. 1 hit.
PROSITEiPS01009. CRISP_1. 1 hit.
PS01010. CRISP_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ39187_ARATH
AccessioniPrimary (citable) accession number: Q39187
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 122 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.