Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Chlorophyll a-b binding protein, chloroplastic

Gene

Lhb1B2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.UniRule annotation

GO - Molecular functioni

  • chlorophyll binding Source: UniProtKB-KW
  • pigment binding Source: GO_Central
  • protein domain specific binding Source: CAFA

GO - Biological processi

Keywordsi

Biological processPhotosynthesis
LigandChlorophyllUniRule annotationSAAS annotation, Chromophore

Names & Taxonomyi

Protein namesi
Recommended name:
Chlorophyll a-b binding protein, chloroplasticUniRule annotation
Gene namesi
Name:Lhb1B2Imported
Synonyms:LHB1B2Imported, LHCB1.5Imported
Ordered Locus Names:At2g34420Imported, At2g34420/T31E10.24Imported
ORF Names:F13P17.32Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G34420
TAIRilocus:2040934 AT2G34420

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChloroplastUniRule annotationSAAS annotation, Membrane, Photosystem IUniRule annotation, Photosystem IIUniRule annotation, Plastid, ThylakoidUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiQ39141

Expressioni

Gene expression databases

ExpressionAtlasiQ39141 differential

Interactioni

GO - Molecular functioni

  • protein domain specific binding Source: CAFA

Protein-protein interaction databases

IntActiQ39141, 1 interactor
STRINGi3702.AT2G34420.1

Structurei

3D structure databases

SMRiQ39141
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiENOG410IU0X Eukaryota
ENOG410ZHBU LUCA
HOGENOMiHOG000238032
KOiK08912
OMAiSILDIWA
OrthoDBiEOG09360I0J

Family and domain databases

Gene3Di1.10.3460.10, 1 hit
InterProiView protein in InterPro
IPR001344 Chloro_AB-bd_pln
IPR022796 Chloroa_b-bind
IPR023329 Chlorophyll_a/b-bd_dom_sf
PANTHERiPTHR21649 PTHR21649, 1 hit
PfamiView protein in Pfam
PF00504 Chloroa_b-bind, 1 hit

Sequencei

Sequence statusi: Complete.

Q39141-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSTMALSS PAFAGKAVKP AASDVLGSGR VTMRKTVAKP KGPSGSPWYG
60 70 80 90 100
SDRVKYLGPF SGEPPSYLTG EFPGDYGWDT AGLSADPETF ARNRELEVIH
110 120 130 140 150
SRWAMLGALG CVFPELLARN GVKFGEAVWF KAGSQIFSDG GLDYLGNPSL
160 170 180 190 200
VHAQSILAIW ATQVILMGAV EGYRVAGDGP LGEAEDLLYP GGSFDPLGLA
210 220 230 240 250
TDPEAFAELK VKELKNGRLA MFSMFGFFVQ AIVTGKGPLE NLADHLADPV
260
NNNAWAFATN FVPGK
Length:265
Mass (Da):28,054
Last modified:November 1, 1996 - v1
Checksum:iD36BEDFB75E5D0D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004077 Genomic DNA Translation: AAC26710.1
AF372886 mRNA Translation: AAK49602.1
AY039561 mRNA Translation: AAK62616.1
AY045806 mRNA Translation: AAK76480.1
AF428397 mRNA Translation: AAL16165.1
AF419548 mRNA Translation: AAL31882.1
AF419587 mRNA Translation: AAL31919.1
AY065125 mRNA Translation: AAL38301.1
AY079101 mRNA Translation: AAL84985.1
AY079110 mRNA Translation: AAL84994.1
AY081587 mRNA Translation: AAM10149.1
AC004481 Genomic DNA Translation: AAM14954.1
AY142513 mRNA Translation: AAN13114.1
CP002685 Genomic DNA Translation: AEC08972.1
AK229627 mRNA Translation: BAF01472.1
X64460 Genomic DNA Translation: CAA45790.1
PIRiS23546
RefSeqiNP_565786.1, NM_128994.3
UniGeneiAt.10812
At.23647
At.24064
At.24351
At.24888
At.27457
At.32199
At.66422
At.71003
At.71384
At.71449
At.71528

Genome annotation databases

EnsemblPlantsiAT2G34420.1; AT2G34420.1; AT2G34420
GeneIDi818005
GrameneiAT2G34420.1; AT2G34420.1; AT2G34420
KEGGiath:AT2G34420

Similar proteinsi

Entry informationi

Entry nameiQ39141_ARATH
AccessioniPrimary (citable) accession number: Q39141
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 155 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health