Reviewed, UniProtKB/Swiss-Prot Q39013 (NAC2_ARATH)

Names and origin

Protein names

Recommended name:
    NAC domain-containing protein 2
      Short name=ANAC002

Gene names

Name:	NAC002
Synonyms:	ATAF1
Ordered Locus Names:	At1g01720
ORF Names:	T1N6.12

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	289 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Subcellular location	Nucleus Potential.
Domain	The NAC domain includes a DNA binding domain and a dimerization domain.
Sequence similarities	Contains 1 NAC domain.

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Cellular component	Nucleus
Ligand	DNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	negative regulation of abscisic acid mediated signaling pathway Inferred from mutant phenotype. Source: TAIR regulation of transcription Inferred from electronic annotation. Source: UniProtKB-KW response to wounding Inferred from expression pattern. Source: TAIR transcription Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW transcription activator activity Traceable author statement. Source: TAIR
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 289	289	NAC domain-containing protein 2		PRO_0000132306
Regions
	Domain	7 – 158	152	NAC

Sequences

	Sequence		Length	Mass (Da)
	Q39013-1 [UniParc]. Last modified August 16, 2004. Version 2. Checksum: DDAC62A101B6CE4B	FASTA	289	32,922
	10 20 30 40 50 60 MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW ELPGLALYGE 70 80 90 100 110 120 KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP KPVGIKKALV FYAGKAPKGE 130 140 150 160 170 180 KTNWIMHEYR LADVDRSVRK KKNSLRLDDW VLCRIYNKKG ATERRGPPPP VVYGDEIMEE 190 200 210 220 230 240 KPKVTEMVMP PPPQQTSEFA YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW 250 260 270 280 SAVSNDNNNT LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Rueth J., Schweyen R., Hirt H. Submitted (AUG-1993) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[4]	"Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana." Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K., Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K., Takahara Y., Yamamoto K., Kikuchi S. DNA Res. 10:239-247(2003) [PubMed: 15029955] [Abstract] Cited for: GENE FAMILY, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	X74755 mRNA. Translation: CAA52771.1. Different initiation. AC009273 Genomic DNA. Translation: AAF78403.1. AF370617 mRNA. Translation: AAK43936.1.
IPI	IPI00547269.
PIR	E86148. S37101.
RefSeq	NP_171677.1.
UniGene	At.134
3D structure databases
SMR	Q39013. Positions 5-159.
ModBase	Search...
Protein-protein interaction databases
STRING	Q39013.
Genome annotation databases
GeneID	839265.
GenomeReviews	Gene locus AT1G01720 in contig CT485782_GR.
KEGG	ath:AT1G01720.
NMPDR	fig|3702.1.peg.283.
Organism-specific databases
GeneFarm	4060.
TAIR	At1g01720.
Phylogenomic databases
OMA	GDEIMEE
Gene expression databases
ArrayExpress	Q39013.
Genevestigator	Q39013.
GermOnline	AT1G01720. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR003441. NAM. [Graphical view]
Pfam	PF02365. NAM. 1 hit. [Graphical view]
PROSITE	PS51005. NAC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

NAC2_ARATH

Accession

Primary (citable) accession number: Q39013
Secondary accession number(s): Q9LQ85

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 16, 2004
Last sequence update:	August 16, 2004
Last modified:	November 3, 2009
This is version 55 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)