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Q38YM3 (FENR1_LACSS) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ferredoxin--NADP reductase 1
Short name=FNR 1
Short name=Fd-NADP+ reductase 1
EC=1.18.1.2
Gene names
Ordered Locus Names:LCA_0403
OrganismLactobacillus sakei subsp. sakei (strain 23K) [Complete proteome] [HAMAP]
Taxonomic identifier314315 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length328 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2 reduced ferredoxin + NADP+ + H+ = 2 oxidized ferredoxin + NADPH. HAMAP MF_01685

Cofactor

Binds 1 FAD per subunit By similarity. HAMAP MF_01685

Subunit structure

Homodimer By similarity. HAMAP MF_01685

Sequence similarities

Belongs to the ferredoxin--NADP reductase type 2 family.

Ontologies

Keywords
   LigandFAD
Flavoprotein
NADP
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionferredoxin-NADP+ reductase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 328328Ferredoxin--NADP reductase 1 HAMAP MF_01685
PRO_0000364860

Sites

Binding site371FAD By similarity
Binding site451FAD By similarity
Binding site491FAD By similarity
Binding site891FAD; via amide nitrogen and carbonyl oxygen By similarity
Binding site3101FAD By similarity

Sequences

Sequence LengthMass (Da)Tools
Q38YM3 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: AA72BD23A721356F

FASTA32836,661
        10         20         30         40         50         60 
MTAMTNIYET TIIGGGPAGL YAAFQAGLYG LNGQLLEGDQ QFGGKVATYA ERVIHDIGGM 

        70         80         90        100        110        120 
PNITGQDLIQ NLTAQAAFYD TPLRTQTLVT DVKYLADQDY YQIDTPDDRY YSQTLILAMG 

       130        140        150        160        170        180 
GGVVRPKQLR LFEEQTFENV HYAPANPEDY RDQRVVLIGP GYNLMELAPH LLATAKSVVW 

       190        200        210        220        230        240 
LTTKRPFVDE AAEKAFLTAY PQIDYYCQPL ASYQQVDQQV TSITLADQTQ ITFDQAVVSL 

       250        260        270        280        290        300 
GYRRSLQTLD QWQLSAEQIE ERPDIWVIGN QIPDRAGISL LTSAFQDGIT AVTEIVAQLK 

       310        320 
PTAKTPMVTT HNPVFQADTK AYWQERLR

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References

[1]"The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K."
Chaillou S., Champomier-Verges M.-C., Cornet M., Crutz-Le Coq A.-M., Dudez A.-M., Martin V., Beaufils S., Darbon-Rongere E., Bossy R., Loux V., Zagorec M.
Nat. Biotechnol. 23:1527-1533(2005) [PubMed: 16273110] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 23K.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CR936503 Genomic DNA. Translation: CAI54704.1.
RefSeqYP_395016.1. NC_007576.1.

3D structure databases

ProteinModelPortalQ38YM3.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ38YM3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3778523.
GenomeReviewsGene locus LCA_0403 in contig CR936503_GR.
KEGGlsa:LSA0403.
PATRIC22273576. VBILacSak116432_0396.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0492.
OMAECNTTIT.

Enzyme and pathway databases

BioCycLSAK314315:LSA0403-MONOMER.

Family and domain databases

HAMAPMF_01685. FENR2.
[Tree]
InterProIPR013027. FAD_pyr_nucl-diS_OxRdtase.
IPR022890. Fd--NADP_Rdtase_type_2.
IPR023753. Pyr_nucl-diS_OxRdtase_FAD/NAD.
IPR000103. Pyridine_nuc-diS_OxRdtase_2.
[Graphical view]
KOK00384.
PANTHERPTHR22912:SF53. PTHR22912:SF53. 1 hit.
PfamPF07992. Pyr_redox_2. 1 hit.
[Graphical view]
PRINTSPR00368. FADPNR.
PR00469. PNDRDTASEII.
ProtoNetSearch...

Entry information

Entry nameFENR1_LACSS
AccessionPrimary (citable) accession number: Q38YM3
Entry history
Integrated into UniProtKB/Swiss-Prot: March 3, 2009
Last sequence update: November 22, 2005
Last modified: January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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