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Protein
Submitted name:

Glycerol uptake facilitator protein, MIP family

Gene

glpF

Organism
Lactobacillus sakei subsp. sakei (strain 23K)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator protein, MIP familyImported
Gene namesi
Name:glpFImported
Ordered Locus Names:LCA_0651Imported
OrganismiLactobacillus sakei subsp. sakei (strain 23K)Imported
Taxonomic identifieri314315 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000002707 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3322HelicalSequence analysisAdd
BLAST
Transmembranei39 – 6123HelicalSequence analysisAdd
BLAST
Transmembranei82 – 10726HelicalSequence analysisAdd
BLAST
Transmembranei136 – 15621HelicalSequence analysisAdd
BLAST
Transmembranei168 – 18922HelicalSequence analysisAdd
BLAST
Transmembranei218 – 23821HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi314315.LSA0651.

Structurei

3D structure databases

ProteinModelPortaliQ38XX4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105D8C. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.
OrthoDBiPOG091H00B1.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q38XX4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDNSIMVQAL GELVGTFILV LLGDGVVAGV SLAKTKANGA GWIAITLGWG
60 70 80 90 100
FAVTLGVYAS AFMGPAHLNP AVTLAFAIIG KVSWSVVLPF IIAQMIGAFL
110 120 130 140 150
GAVVVWIQYY PHWQATDDQS AILGTFATGP AIRSPFANLM SEIIGTFVLV
160 170 180 190 200
FALLALTRGQ FTEGLNPLVV GVIITAIGLS LGGTTGYAIN PARDLGPRIA
210 220 230
HAVLPIANKG DSDWQYSWIP VIGPFVGGIL GALLFVLLP
Length:239
Mass (Da):24,887
Last modified:November 22, 2005 - v1
Checksum:i397A9A9BA2ECFD4D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR936503 Genomic DNA. Translation: CAI54955.1.
RefSeqiWP_011374360.1. NC_007576.1.

Genome annotation databases

EnsemblBacteriaiCAI54955; CAI54955; LCA_0651.
KEGGilsa:LCA_0651.
PATRICi22274122. VBILacSak116432_0629.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR936503 Genomic DNA. Translation: CAI54955.1.
RefSeqiWP_011374360.1. NC_007576.1.

3D structure databases

ProteinModelPortaliQ38XX4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi314315.LSA0651.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAI54955; CAI54955; LCA_0651.
KEGGilsa:LCA_0651.
PATRICi22274122. VBILacSak116432_0629.

Phylogenomic databases

eggNOGiENOG4105D8C. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.
OrthoDBiPOG091H00B1.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ38XX4_LACSS
AccessioniPrimary (citable) accession number: Q38XX4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: September 7, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.