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Q38XI0

- DEOD_LACSS

UniProt

Q38XI0 - DEOD_LACSS

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Protein

Purine nucleoside phosphorylase DeoD-type

Gene

deoD

Organism
Lactobacillus sakei subsp. sakei (strain 23K)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciLSAK314315:GCKE-1465-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-typeUniRule annotation (EC:2.4.2.1UniRule annotation)
Short name:
PNPUniRule annotation
Gene namesi
Name:deoDUniRule annotation
Ordered Locus Names:LCA_0797
OrganismiLactobacillus sakei subsp. sakei (strain 23K)
Taxonomic identifieri314315 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000002707: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 234234Purine nucleoside phosphorylase DeoD-typePRO_1000186210Add
BLAST

Interactioni

Subunit structurei

Homohexamer.UniRule annotation

Protein-protein interaction databases

STRINGi314315.LSA0797.

Structurei

3D structure databases

ProteinModelPortaliQ38XI0.
SMRiQ38XI0. Positions 1-233.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PNP/UDP phosphorylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0813.
KOiK03784.
OMAiECYNEVR.
OrthoDBiEOG6BKJC5.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q38XI0 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSTHIEAQQG DIAETVLLPG DPLRAKYIAE TFLTDVHRYN TIRNAFGYTG
60 70 80 90 100
YYKGQAISVQ ASGMGIPSIS IYANELIQFY GVKRLIRVGT CGGLGTDVHV
110 120 130 140 150
RDVMIAQSAS TDSAIIQNTF GAGLYYAPTA DFKLLMKAYQ AAQQAQIAVK
160 170 180 190 200
VGNILSEDRF YNDEIDRQKL IQYGVLGSEM EAAALYMLAA KFNVQALAVL
210 220 230
TISNHIITGE ETSAEEREKS FNEMITVALE AGIA
Length:234
Mass (Da):25,522
Last modified:November 22, 2005 - v1
Checksum:iEE90E3B126B9984E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR936503 Genomic DNA. Translation: CAI55101.1.
RefSeqiYP_395410.1. NC_007576.1.

Genome annotation databases

EnsemblBacteriaiCAI55101; CAI55101; LCA_0797.
GeneIDi3778271.
KEGGilsa:LSA0797.
PATRICi22274414. VBILacSak116432_0774.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR936503 Genomic DNA. Translation: CAI55101.1 .
RefSeqi YP_395410.1. NC_007576.1.

3D structure databases

ProteinModelPortali Q38XI0.
SMRi Q38XI0. Positions 1-233.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 314315.LSA0797.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAI55101 ; CAI55101 ; LCA_0797 .
GeneIDi 3778271.
KEGGi lsa:LSA0797.
PATRICi 22274414. VBILacSak116432_0774.

Phylogenomic databases

eggNOGi COG0813.
KOi K03784.
OMAi ECYNEVR.
OrthoDBi EOG6BKJC5.

Enzyme and pathway databases

BioCyci LSAK314315:GCKE-1465-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 23K.

Entry informationi

Entry nameiDEOD_LACSS
AccessioniPrimary (citable) accession number: Q38XI0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: November 22, 2005
Last modified: October 29, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3