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Q38XI0

- DEOD_LACSS

UniProt

Q38XI0 - DEOD_LACSS

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Protein
Purine nucleoside phosphorylase DeoD-type
Gene
deoD, LCA_0797
Organism
Lactobacillus sakei subsp. sakei (strain 23K)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciLSAK314315:GCKE-1465-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-type (EC:2.4.2.1)
Short name:
PNP
Gene namesi
Name:deoD
Ordered Locus Names:LCA_0797
OrganismiLactobacillus sakei subsp. sakei (strain 23K)
Taxonomic identifieri314315 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000002707: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 234234Purine nucleoside phosphorylase DeoD-typeUniRule annotation
PRO_1000186210Add
BLAST

Interactioni

Subunit structurei

Homohexamer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi314315.LSA0797.

Structurei

3D structure databases

ProteinModelPortaliQ38XI0.
SMRiQ38XI0. Positions 1-233.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0813.
KOiK03784.
OMAiECYNEVR.
OrthoDBiEOG6BKJC5.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q38XI0-1 [UniParc]FASTAAdd to Basket

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MSTHIEAQQG DIAETVLLPG DPLRAKYIAE TFLTDVHRYN TIRNAFGYTG    50
YYKGQAISVQ ASGMGIPSIS IYANELIQFY GVKRLIRVGT CGGLGTDVHV 100
RDVMIAQSAS TDSAIIQNTF GAGLYYAPTA DFKLLMKAYQ AAQQAQIAVK 150
VGNILSEDRF YNDEIDRQKL IQYGVLGSEM EAAALYMLAA KFNVQALAVL 200
TISNHIITGE ETSAEEREKS FNEMITVALE AGIA 234
Length:234
Mass (Da):25,522
Last modified:November 22, 2005 - v1
Checksum:iEE90E3B126B9984E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR936503 Genomic DNA. Translation: CAI55101.1.
RefSeqiWP_011374503.1. NC_007576.1.
YP_395410.1. NC_007576.1.

Genome annotation databases

EnsemblBacteriaiCAI55101; CAI55101; LCA_0797.
GeneIDi3778271.
KEGGilsa:LSA0797.
PATRICi22274414. VBILacSak116432_0774.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR936503 Genomic DNA. Translation: CAI55101.1 .
RefSeqi WP_011374503.1. NC_007576.1.
YP_395410.1. NC_007576.1.

3D structure databases

ProteinModelPortali Q38XI0.
SMRi Q38XI0. Positions 1-233.
ModBasei Search...

Protein-protein interaction databases

STRINGi 314315.LSA0797.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAI55101 ; CAI55101 ; LCA_0797 .
GeneIDi 3778271.
KEGGi lsa:LSA0797.
PATRICi 22274414. VBILacSak116432_0774.

Phylogenomic databases

eggNOGi COG0813.
KOi K03784.
OMAi ECYNEVR.
OrthoDBi EOG6BKJC5.

Enzyme and pathway databases

BioCyci LSAK314315:GCKE-1465-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 23K.

Entry informationi

Entry nameiDEOD_LACSS
AccessioniPrimary (citable) accession number: Q38XI0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: November 22, 2005
Last modified: September 3, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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