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Q38XI0

- DEOD_LACSS

UniProt

Q38XI0 - DEOD_LACSS

Protein

Purine nucleoside phosphorylase DeoD-type

Gene

deoD

Organism
Lactobacillus sakei subsp. sakei (strain 23K)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 66 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
    Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. purine nucleoside metabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Enzyme and pathway databases

    BioCyciLSAK314315:GCKE-1465-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Purine nucleoside phosphorylase DeoD-typeUniRule annotation (EC:2.4.2.1UniRule annotation)
    Short name:
    PNPUniRule annotation
    Gene namesi
    Name:deoDUniRule annotation
    Ordered Locus Names:LCA_0797
    OrganismiLactobacillus sakei subsp. sakei (strain 23K)
    Taxonomic identifieri314315 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
    ProteomesiUP000002707: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 234234Purine nucleoside phosphorylase DeoD-typePRO_1000186210Add
    BLAST

    Interactioni

    Subunit structurei

    Homohexamer.UniRule annotation

    Protein-protein interaction databases

    STRINGi314315.LSA0797.

    Structurei

    3D structure databases

    ProteinModelPortaliQ38XI0.
    SMRiQ38XI0. Positions 1-233.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PNP/UDP phosphorylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0813.
    KOiK03784.
    OMAiECYNEVR.
    OrthoDBiEOG6BKJC5.

    Family and domain databases

    Gene3Di3.40.50.1580. 1 hit.
    HAMAPiMF_01627. Pur_nucleosid_phosp.
    InterProiIPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view]
    PANTHERiPTHR21234. PTHR21234. 1 hit.
    PfamiPF01048. PNP_UDP_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF53167. SSF53167. 1 hit.
    TIGRFAMsiTIGR00107. deoD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q38XI0-1 [UniParc]FASTAAdd to Basket

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    MSTHIEAQQG DIAETVLLPG DPLRAKYIAE TFLTDVHRYN TIRNAFGYTG    50
    YYKGQAISVQ ASGMGIPSIS IYANELIQFY GVKRLIRVGT CGGLGTDVHV 100
    RDVMIAQSAS TDSAIIQNTF GAGLYYAPTA DFKLLMKAYQ AAQQAQIAVK 150
    VGNILSEDRF YNDEIDRQKL IQYGVLGSEM EAAALYMLAA KFNVQALAVL 200
    TISNHIITGE ETSAEEREKS FNEMITVALE AGIA 234
    Length:234
    Mass (Da):25,522
    Last modified:November 22, 2005 - v1
    Checksum:iEE90E3B126B9984E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR936503 Genomic DNA. Translation: CAI55101.1.
    RefSeqiWP_011374503.1. NC_007576.1.
    YP_395410.1. NC_007576.1.

    Genome annotation databases

    EnsemblBacteriaiCAI55101; CAI55101; LCA_0797.
    GeneIDi3778271.
    KEGGilsa:LSA0797.
    PATRICi22274414. VBILacSak116432_0774.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR936503 Genomic DNA. Translation: CAI55101.1 .
    RefSeqi WP_011374503.1. NC_007576.1.
    YP_395410.1. NC_007576.1.

    3D structure databases

    ProteinModelPortali Q38XI0.
    SMRi Q38XI0. Positions 1-233.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 314315.LSA0797.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAI55101 ; CAI55101 ; LCA_0797 .
    GeneIDi 3778271.
    KEGGi lsa:LSA0797.
    PATRICi 22274414. VBILacSak116432_0774.

    Phylogenomic databases

    eggNOGi COG0813.
    KOi K03784.
    OMAi ECYNEVR.
    OrthoDBi EOG6BKJC5.

    Enzyme and pathway databases

    BioCyci LSAK314315:GCKE-1465-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.1580. 1 hit.
    HAMAPi MF_01627. Pur_nucleosid_phosp.
    InterProi IPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view ]
    PANTHERi PTHR21234. PTHR21234. 1 hit.
    Pfami PF01048. PNP_UDP_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53167. SSF53167. 1 hit.
    TIGRFAMsi TIGR00107. deoD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 23K.

    Entry informationi

    Entry nameiDEOD_LACSS
    AccessioniPrimary (citable) accession number: Q38XI0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 66 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3