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Q38VE5 (Q38VE5_LACSS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.86 EMBL CAI55838.1
Gene names
Ordered Locus Names:LCA_1531 EMBL CAI55838.1
OrganismLactobacillus sakei subsp. sakei (strain 23K) [Complete proteome] [HAMAP] EMBL CAI55838.1
Taxonomic identifier314315 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU004468 EMBL CAI55838.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_function6-phospho-beta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q38VE5 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 7CFE14F1EF5114C5

FASTA48254,815
        10         20         30         40         50         60 
MEYQQLAPFP QDFLWGSASA AYQIEGAYQE AGKGQSVWDQ FVRIPGKTFK ATNGDVAVDH 

        70         80         90        100        110        120 
YHRYQEDVAL MARAGLKAYR FSISWPRVLP TGRGTVNEEG LAFYDRLIDE LIANQIEPIV 

       130        140        150        160        170        180 
TIYHWDLPQA LQDEYGGWES RQIIPDFTAY AALLFERFGD RVRHWVTLNE QNIFITHGYL 

       190        200        210        220        230        240 
TAEHPPAVMD AKRTYQANHM ANLANASVIK LFHEKGYQGG NGPSFAYSPT YALDADPVNQ 

       250        260        270        280        290        300 
IAADDAEQLN ANLWLDIYAW GRYPKLILNY WAREGLLPDI TAADQALLQD PLARPDFMGL 

       310        320        330        340        350        360 
NYYQTTTVTA NPLVGGVGLT KQNTSGKKGT SQASGVPGLF KTSDNPYMQQ TDWDWNIDPE 

       370        380        390        400        410        420 
GLRMALRRIE SRYNLPVLIT ENGLGAYDRL EGAGEVHDEY RIVFLKAHIQ AIQEAITDGV 

       430        440        450        460        470        480 
TVIGYTTWSF TDLLSWTNGY QKRYGFVYVD RDETDEKELN RYPKDSFYWY QRVIRSNGQQ 


LN 

« Hide

References

[1]"The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K."
Chaillou S., Champomier-Verges M.-C., Cornet M., Crutz-Le Coq A.-M., Dudez A.-M., Martin V., Beaufils S., Darbon-Rongere E., Bossy R., Loux V., Zagorec M.
Nat. Biotechnol. 23:1527-1533(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 23K.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR936503 Genomic DNA. Translation: CAI55838.1.
RefSeqYP_396145.1. NC_007576.1.

3D structure databases

ProteinModelPortalQ38VE5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING314315.LSA1531.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAI55838; CAI55838; LCA_1531.
GeneID3777065.
KEGGlsa:LSA1531.
PATRIC22275878. VBILacSak116432_1499.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2723.
HOGENOMHOG000088631.
KOK01223.
OMANEQNIFI.
OrthoDBEOG60658J.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ38VE5_LACSS
AccessionPrimary (citable) accession number: Q38VE5
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)