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Q38UN4 (Q38UN4_LACSS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.26 EMBL CAI56101.1
Gene names
Name:scrB EMBL CAI56101.1
Ordered Locus Names:LSA1793
ORF Names:LCA_1793 EMBL CAI56101.1
OrganismLactobacillus sakei subsp. sakei (strain 23K) [Complete proteome] [HAMAP]
Taxonomic identifier314315 [NCBI]
Taxonomic lineageBacteriaFirmicutesLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length491 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 32 family. RuleBase RU000449

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU000449 EMBL CAI56101.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functionsucrose alpha-glucosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q38UN4 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: CA5E81FEDABEE8FD

FASTA49156,239
        10         20         30         40         50         60 
MPLITNWTRQ LRYQPYSDWS IDYQQQLLNR VQNSPYRLNY HIQPDTGLLN DPNGFSYFNH 

        70         80         90        100        110        120 
QWHLFYQNYP MGPVHGLKSW HHLISDDLIN WRKATPLLPD GNFDSHGAYS GSALPINDRL 

       130        140        150        160        170        180 
FLFYTGNVRN SDWKRSPFQN GAWLSQAGTI SKISEPLIKQ PRHYTDHFRD PMIFKYQDQI 

       190        200        210        220        230        240 
MALIGAQDNN KIGKIAVFKA DHNNINDWRP LGELTFTSEK LGYMIECPNL IFINHQPVLI 

       250        260        270        280        290        300 
FCPQGLTSEV ISYQNIYPNM YVVGHSFELN TTTITQPSEL TNLDDGFDCY ATQAFNAPDG 

       310        320        330        340        350        360 
RALAVSWLGL PEIEYPTDKD GWAHCLSLVK ELTLHDNQLY QYPVEETKAL RQTKQILSLS 

       370        380        390        400        410        420 
KQSIIPTTNA YELELEVPAN TSQTLHVFSN PSKSNGLVLT IDTTNGKITM DRSNAGVSFG 

       430        440        450        460        470        480 
QQYGQIRTTN VQPHHPIHIN LFADQSVVEL YINHGAKVMS SRLFPTENQN IIWAEIPQKA 

       490 
QLWPLSKVNN N 

« Hide

References

[1]"The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K."
Chaillou S., Champomier-Verges M.-C., Cornet M., Crutz-Le Coq A.-M., Dudez A.-M., Martin V., Beaufils S., Darbon-Rongere E., Bossy R., Loux V., Zagorec M.
Nat. Biotechnol. 23:1527-1533(2005) [PubMed: 16273110] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR936503 Genomic DNA. Translation: CAI56101.1.
RefSeqYP_396406.1. NC_007576.1.

3D structure databases

ProteinModelPortalQ38UN4.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ38UN4.

Protein family/group databases

CAZyGH32. Glycoside Hydrolase Family 32.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3778658.
GenomeReviewsGene locus LCA_1793 in contig CR936503_GR.
KEGGlsa:LSA1793.
PATRIC22276436. VBILacSak116432_1754.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1621.
HOGENOMHBG693902.
OMASYQNIYP.
PhylomeDBQ38UN4.
ProtClustDBCLSK458390.

Family and domain databases

InterProIPR008985. ConA-like_lec_gl.
IPR001362. Glyco_hydro_32.
IPR018053. Glyco_hydro_32_AS.
IPR013189. Glyco_hydro_32_C.
IPR013148. Glyco_hydro_32_N.
IPR023296. Glyco_hydro_43_beta-prop.
IPR006232. Suc6P_hydrolase.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KOK01193.
PfamPF08244. Glyco_hydro_32C. 1 hit.
PF00251. Glyco_hydro_32N. 1 hit.
[Graphical view]
SMARTSM00640. Glyco_32. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
TIGRFAMsTIGR01322. ScrB_fam. 1 hit.
PROSITEPS00609. GLYCOSYL_HYDROL_F32. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ38UN4_LACSS
AccessionPrimary (citable) accession number: Q38UN4
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)