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Q38FV6

- Q38FV6_TRYB2

UniProt

Q38FV6 - Q38FV6_TRYB2

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Protein
Submitted name:

60S ribosomal protein L38, putative

Gene

Tb09.160.0815

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L38, putativeImported
Gene namesi
ORF Names:Tb09.160.0815Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 9

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5691.Tb09.160.0815.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57p1-82[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L38e family.UniRule annotation

Phylogenomic databases

eggNOGiNOG323549.
HOGENOMiHOG000188979.
InParanoidiQ38FV6.
KOiK02923.
OMAiRKDASQA.

Family and domain databases

InterProiIPR002675. Ribosomal_L38e.
[Graphical view]
PANTHERiPTHR10965. PTHR10965. 1 hit.
PfamiPF01781. Ribosomal_L38e. 1 hit.
[Graphical view]
ProDomiPD010361. Ribosomal_L38e. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q38FV6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPREIKNLKE FLAICSRKDA RCVKVKHNPK VTKFKVRCSR HLYTLVMADK
60 70 80
KKADKIERSI HPSVKKITVT SRSHANKNTP SK
Length:82
Mass (Da):9,500
Last modified:November 22, 2005 - v1
Checksum:i714F762583347E19
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000207 Genomic DNA. Translation: EAN76314.1.
RefSeqiXP_803515.1. XM_798422.1.

Genome annotation databases

GeneIDi3660239.
KEGGitbr:Tb09.160.0815.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000207 Genomic DNA. Translation: EAN76314.1 .
RefSeqi XP_803515.1. XM_798422.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZF7 electron microscopy 5.57 p 1-82 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5691.Tb09.160.0815.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 3660239.
KEGGi tbr:Tb09.160.0815.

Phylogenomic databases

eggNOGi NOG323549.
HOGENOMi HOG000188979.
InParanoidi Q38FV6.
KOi K02923.
OMAi RKDASQA.

Family and domain databases

InterProi IPR002675. Ribosomal_L38e.
[Graphical view ]
PANTHERi PTHR10965. PTHR10965. 1 hit.
Pfami PF01781. Ribosomal_L38e. 1 hit.
[Graphical view ]
ProDomi PD010361. Ribosomal_L38e. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  2. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ38FV6_TRYB2
AccessioniPrimary (citable) accession number: Q38FV6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: October 29, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3