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Q38FD9

- Q38FD9_TRYB2

UniProt

Q38FD9 - Q38FD9_TRYB2

Protein
Submitted name:

Ribosomal protein S7, putative

Gene

Tb09.160.2550

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribosomal protein S7, putativeImported
    Gene namesi
    ORF Names:Tb09.160.2550Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 9

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb09.160.2550.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZEYelectron microscopy5.5741-202[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG280542.
    HOGENOMiHOG000197237.
    KOiK02993.
    OMAiIEVGHGK.

    Family and domain databases

    InterProiIPR000554. Ribosomal_S7e.
    [Graphical view]
    PANTHERiPTHR11278. PTHR11278. 1 hit.
    PfamiPF01251. Ribosomal_S7e. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q38FD9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSAQPHLRKL RKLKRANPSQ EEESVARVLF ELEGSHKTLR AQLPRFHINT    50
    VRTSSSPRHK KTAMIILYPL RFIMLVRKIQ RTLTAELEKR FPGNIVVLVA 100
    QRKITKRPND VYKLQQVQRS RTSVAVFENI LNDLIYPCDV VGRRWRYRTD 150
    GSKLMKVFLD ARDRKRVESR LPLLAHVYKL LTHRTVTFGF MWNPKLQQVS 200
    SR 202
    Length:202
    Mass (Da):23,841
    Last modified:November 22, 2005 - v1
    Checksum:iA203259125501AC4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000207 Genomic DNA. Translation: EAN76481.1.
    RefSeqiXP_803698.1. XM_798605.1.

    Genome annotation databases

    EnsemblProtistsiEAN76481; EAN76481; Tb09.160.2550.
    GeneIDi3660269.
    KEGGitbr:Tb09.160.2550.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000207 Genomic DNA. Translation: EAN76481.1 .
    RefSeqi XP_803698.1. XM_798605.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZEY electron microscopy 5.57 4 1-202 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb09.160.2550.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAN76481 ; EAN76481 ; Tb09.160.2550 .
    GeneIDi 3660269.
    KEGGi tbr:Tb09.160.2550.

    Phylogenomic databases

    eggNOGi NOG280542.
    HOGENOMi HOG000197237.
    KOi K02993.
    OMAi IEVGHGK.

    Family and domain databases

    InterProi IPR000554. Ribosomal_S7e.
    [Graphical view ]
    PANTHERi PTHR11278. PTHR11278. 1 hit.
    Pfami PF01251. Ribosomal_S7e. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    2. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ38FD9_TRYB2
    AccessioniPrimary (citable) accession number: Q38FD9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3