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Q38EI9

- Q38EI9_TRYB2

UniProt

Q38EI9 - Q38EI9_TRYB2

Protein
Submitted name:

60S ribosomal protein L11, putative

Gene

Tb09.160.5580

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    60S ribosomal protein L11, putativeImported
    Gene namesi
    ORF Names:Tb09.160.5580Imported, Tb09.160.5590Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 9

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb09.160.5590.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57L1-194[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L5P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0094.
    HOGENOMiHOG000231312.
    KOiK02868.
    OMAiEDTMAWF.

    Family and domain databases

    Gene3Di3.30.1440.10. 1 hit.
    InterProiIPR002132. Ribosomal_L5.
    IPR020929. Ribosomal_L5_CS.
    IPR022803. Ribosomal_L5_domain.
    [Graphical view]
    PANTHERiPTHR11994. PTHR11994. 1 hit.
    PfamiPF00281. Ribosomal_L5. 1 hit.
    PF00673. Ribosomal_L5_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002161. Ribosomal_L5. 1 hit.
    SUPFAMiSSF55282. SSF55282. 1 hit.
    PROSITEiPS00358. RIBOSOMAL_L5. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q38EI9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAEAKVSAEK KAANPMREIV VKKLCINICV GESGDRLTRA SKVLEQLCEQ    50
    TPVLSRARLT VRTFGIRRNE KIAVHCTVRG KKAEELLEKG LKVKEFELKS 100
    YNFSDTGSFG FGISEHIDLG IKYDPSTGIY GMDFYVVLGR RGERVAHRKR 150
    RVSRVGFNHR VRKEEAMKWF EKVHDGIIFQ AKKKKKSMVR RRRR 194
    Length:194
    Mass (Da):22,369
    Last modified:November 22, 2005 - v1
    Checksum:iA27F3DE06B46BE74
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000207 Genomic DNA. Translation: EAN76780.1.
    CM000207 Genomic DNA. Translation: EAN76781.1.
    RefSeqiXP_827110.1. XM_822017.1.
    XP_827111.1. XM_822018.1.

    Genome annotation databases

    EnsemblProtistsiEAN76780; EAN76780; Tb09.160.5580.
    EAN76781; EAN76781; Tb09.160.5590.
    GeneIDi3660450.
    3660451.
    KEGGitbr:Tb09.160.5580.
    tbr:Tb09.160.5590.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000207 Genomic DNA. Translation: EAN76780.1 .
    CM000207 Genomic DNA. Translation: EAN76781.1 .
    RefSeqi XP_827110.1. XM_822017.1.
    XP_827111.1. XM_822018.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 L 1-194 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb09.160.5590.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAN76780 ; EAN76780 ; Tb09.160.5580 .
    EAN76781 ; EAN76781 ; Tb09.160.5590 .
    GeneIDi 3660450.
    3660451.
    KEGGi tbr:Tb09.160.5580.
    tbr:Tb09.160.5590.

    Phylogenomic databases

    eggNOGi COG0094.
    HOGENOMi HOG000231312.
    KOi K02868.
    OMAi EDTMAWF.

    Family and domain databases

    Gene3Di 3.30.1440.10. 1 hit.
    InterProi IPR002132. Ribosomal_L5.
    IPR020929. Ribosomal_L5_CS.
    IPR022803. Ribosomal_L5_domain.
    [Graphical view ]
    PANTHERi PTHR11994. PTHR11994. 1 hit.
    Pfami PF00281. Ribosomal_L5. 1 hit.
    PF00673. Ribosomal_L5_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002161. Ribosomal_L5. 1 hit.
    SUPFAMi SSF55282. SSF55282. 1 hit.
    PROSITEi PS00358. RIBOSOMAL_L5. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ38EI9_TRYB2
    AccessioniPrimary (citable) accession number: Q38EI9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3