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Q38DN9

- Q38DN9_TRYB2

UniProt

Q38DN9 - Q38DN9_TRYB2

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Protein
Submitted name: 60S ribosomal protein L27a
Gene
Tb09.211.2650, Tb09.v1.0640
Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L27aImported
Gene namesi
ORF Names:Tb09.211.2650Imported, Tb09.v1.0640Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)
Taxonomic identifieri999953 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 9

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5691.Tb09.v1.0640.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57b1-145[»]

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L15P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0200.
HOGENOMiHOG000231263.
KOiK02900.
OMAiARWVSKL.

Family and domain databases

InterProiIPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PfamiPF00828. Ribosomal_L18e. 1 hit.
[Graphical view]
SUPFAMiSSF52080. SSF52080. 1 hit.

Sequencei

Sequence statusi: Complete.

Q38DN9-1 [UniParc]FASTAAdd to Basket

« Hide

MPTRFKKTRH QRGSTFCGYG RVGKHRKHPS GRGNAGGEHH HRINFRKYHP    50
GYFGKCGMNH YHKKKNTTWK PTINLDNLTK LMAKDEAMKA KKGEALPVID 100
LLANGYSKLL GNGHLQAPCI VKARWVSKLA DKKIRKAGGA VVLQA 145
Length:145
Mass (Da):16,266
Last modified:November 22, 2005 - v1
Checksum:iDAC6275D9BB23D7C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000207 Genomic DNA. Translation: EAN77079.1.
CM000207 Genomic DNA. Translation: EAN77081.1.
RefSeqiXP_827409.1. XM_822316.1.
XP_827411.1. XM_822318.1.

Genome annotation databases

EnsemblProtistsiEAN77079; EAN77079; Tb09.v1.0640.
EAN77081; EAN77081; Tb09.211.2650.
GeneIDi3660866.
3660868.
KEGGitbr:Tb09.211.2650.
tbr:Tb09.v1.0640.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000207 Genomic DNA. Translation: EAN77079.1 .
CM000207 Genomic DNA. Translation: EAN77081.1 .
RefSeqi XP_827409.1. XM_822316.1.
XP_827411.1. XM_822318.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZF7 electron microscopy 5.57 b 1-145 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5691.Tb09.v1.0640.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi EAN77079 ; EAN77079 ; Tb09.v1.0640 .
EAN77081 ; EAN77081 ; Tb09.211.2650 .
GeneIDi 3660866.
3660868.
KEGGi tbr:Tb09.211.2650.
tbr:Tb09.v1.0640.

Phylogenomic databases

eggNOGi COG0200.
HOGENOMi HOG000231263.
KOi K02900.
OMAi ARWVSKL.

Family and domain databases

InterProi IPR021131. Ribosomal_L18e/L15P.
[Graphical view ]
Pfami PF00828. Ribosomal_L18e. 1 hit.
[Graphical view ]
SUPFAMi SSF52080. SSF52080. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  2. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ38DN9_TRYB2
AccessioniPrimary (citable) accession number: Q38DN9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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