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Q38DH8

- Q38DH8_TRYB2

UniProt

Q38DH8 - Q38DH8_TRYB2

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Protein
Submitted name:

60S ribosomal subunit protein L31, putative

Gene
Tb09.211.3270, Tb09.211.3280
Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal subunit protein L31, putativeImported
Gene namesi
ORF Names:Tb09.211.3270Imported, Tb09.211.3280Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)
Taxonomic identifieri999953 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 9

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5691.Tb09.211.3280.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57h1-188[»]

Family & Domainsi

Phylogenomic databases

eggNOGiNOG299323.
HOGENOMiHOG000125363.
KOiK02910.
OMAiWHKGVKG.

Family and domain databases

Gene3Di3.10.440.10. 1 hit.
InterProiIPR000054. Ribosomal_L31e.
IPR023621. Ribosomal_L31e_dom.
[Graphical view]
PANTHERiPTHR10956. PTHR10956. 1 hit.
PfamiPF01198. Ribosomal_L31e. 1 hit.
[Graphical view]
ProDomiPD006030. Ribosomal_L31e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF54575. SSF54575. 1 hit.

Sequencei

Sequence statusi: Complete.

Q38DH8-1 [UniParc]FASTAAdd to Basket

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MTRAGFKGKV LGKEKKLALL EARKKAAEAR KSRDDRRWKR VLAKMDPEKR    50
KKYHGVGNTA EHSRVRGCTR ASLFKRTGRK PDNIVMEASI HLSKLLKKRT 100
FHKRAPIAIK RIRSFVGKLM KTKDNRIDAS LNTFIWHKGV KGVPGRVRVR 150
VERKSETMEG GKRKHFYTVI SHIPVPSFKN LTTKVIEQ 188
Length:188
Mass (Da):21,693
Last modified:November 22, 2005 - v1
Checksum:i55D8C54A75C5F92E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000207 Genomic DNA. Translation: EAN77141.1.
CM000207 Genomic DNA. Translation: EAN77142.1.
RefSeqiXP_827471.1. XM_822378.1.
XP_827472.1. XM_822379.1.

Genome annotation databases

EnsemblProtistsiEAN77141; EAN77141; Tb09.211.3270.
EAN77142; EAN77142; Tb09.211.3280.
GeneIDi3660930.
3660931.
KEGGitbr:Tb09.211.3270.
tbr:Tb09.211.3280.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000207 Genomic DNA. Translation: EAN77141.1 .
CM000207 Genomic DNA. Translation: EAN77142.1 .
RefSeqi XP_827471.1. XM_822378.1.
XP_827472.1. XM_822379.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZF7 electron microscopy 5.57 h 1-188 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5691.Tb09.211.3280.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi EAN77141 ; EAN77141 ; Tb09.211.3270 .
EAN77142 ; EAN77142 ; Tb09.211.3280 .
GeneIDi 3660930.
3660931.
KEGGi tbr:Tb09.211.3270.
tbr:Tb09.211.3280.

Phylogenomic databases

eggNOGi NOG299323.
HOGENOMi HOG000125363.
KOi K02910.
OMAi WHKGVKG.

Family and domain databases

Gene3Di 3.10.440.10. 1 hit.
InterProi IPR000054. Ribosomal_L31e.
IPR023621. Ribosomal_L31e_dom.
[Graphical view ]
PANTHERi PTHR10956. PTHR10956. 1 hit.
Pfami PF01198. Ribosomal_L31e. 1 hit.
[Graphical view ]
ProDomi PD006030. Ribosomal_L31e. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF54575. SSF54575. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  2. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ38DH8_TRYB2
AccessioniPrimary (citable) accession number: Q38DH8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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