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Q38DH8

- Q38DH8_TRYB2

UniProt

Q38DH8 - Q38DH8_TRYB2

Protein
Submitted name:

60S ribosomal subunit protein L31, putative

Gene

Tb09.211.3270

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    60S ribosomal subunit protein L31, putativeImported
    Gene namesi
    ORF Names:Tb09.211.3270Imported, Tb09.211.3280Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 9

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb09.211.3280.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57h1-188[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG299323.
    HOGENOMiHOG000125363.
    KOiK02910.
    OMAiWHKGVKG.

    Family and domain databases

    Gene3Di3.10.440.10. 1 hit.
    InterProiIPR000054. Ribosomal_L31e.
    IPR023621. Ribosomal_L31e_dom.
    [Graphical view]
    PANTHERiPTHR10956. PTHR10956. 1 hit.
    PfamiPF01198. Ribosomal_L31e. 1 hit.
    [Graphical view]
    ProDomiPD006030. Ribosomal_L31e. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF54575. SSF54575. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q38DH8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTRAGFKGKV LGKEKKLALL EARKKAAEAR KSRDDRRWKR VLAKMDPEKR    50
    KKYHGVGNTA EHSRVRGCTR ASLFKRTGRK PDNIVMEASI HLSKLLKKRT 100
    FHKRAPIAIK RIRSFVGKLM KTKDNRIDAS LNTFIWHKGV KGVPGRVRVR 150
    VERKSETMEG GKRKHFYTVI SHIPVPSFKN LTTKVIEQ 188
    Length:188
    Mass (Da):21,693
    Last modified:November 22, 2005 - v1
    Checksum:i55D8C54A75C5F92E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000207 Genomic DNA. Translation: EAN77141.1.
    CM000207 Genomic DNA. Translation: EAN77142.1.
    RefSeqiXP_827471.1. XM_822378.1.
    XP_827472.1. XM_822379.1.

    Genome annotation databases

    EnsemblProtistsiEAN77141; EAN77141; Tb09.211.3270.
    EAN77142; EAN77142; Tb09.211.3280.
    GeneIDi3660930.
    3660931.
    KEGGitbr:Tb09.211.3270.
    tbr:Tb09.211.3280.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000207 Genomic DNA. Translation: EAN77141.1 .
    CM000207 Genomic DNA. Translation: EAN77142.1 .
    RefSeqi XP_827471.1. XM_822378.1.
    XP_827472.1. XM_822379.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 h 1-188 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb09.211.3280.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAN77141 ; EAN77141 ; Tb09.211.3270 .
    EAN77142 ; EAN77142 ; Tb09.211.3280 .
    GeneIDi 3660930.
    3660931.
    KEGGi tbr:Tb09.211.3270.
    tbr:Tb09.211.3280.

    Phylogenomic databases

    eggNOGi NOG299323.
    HOGENOMi HOG000125363.
    KOi K02910.
    OMAi WHKGVKG.

    Family and domain databases

    Gene3Di 3.10.440.10. 1 hit.
    InterProi IPR000054. Ribosomal_L31e.
    IPR023621. Ribosomal_L31e_dom.
    [Graphical view ]
    PANTHERi PTHR10956. PTHR10956. 1 hit.
    Pfami PF01198. Ribosomal_L31e. 1 hit.
    [Graphical view ]
    ProDomi PD006030. Ribosomal_L31e. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF54575. SSF54575. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ38DH8_TRYB2
    AccessioniPrimary (citable) accession number: Q38DH8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3