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Q38D25

- Q38D25_TRYB2

UniProt

Q38D25 - Q38D25_TRYB2

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Protein
Submitted name: 60S ribosomal protein L26, putative
Gene
Tb09.211.4850
Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L26, putativeImported
Gene namesi
ORF Names:Tb09.211.4850Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)
Taxonomic identifieri999953 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 9

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5691.Tb09.211.4850.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57Z1-143[»]
ProteinModelPortaliQ38D25.
SMRiQ38D25. Positions 8-118.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0198.
HOGENOMiHOG000216571.
KOiK02898.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR005756. Ribosomal_L26/L24P_euk/arc.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR11143. PTHR11143. 1 hit.
PfamiPF00467. KOW. 1 hit.
[Graphical view]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01080. rplX_A_E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q38D25-1 [UniParc]FASTAAdd to Basket

« Hide

MVGIKCRNRR KARRAHFQAP SHVRRILMSA PLSKELRAKY NVRSMPVRKD    50
DEVRVKRGKF KGREGRVTAC YRLKWVIHID KVSCEKANGT TVPVGVHTSN 100
VEITKLKLNT RRKAILERKD RSTKTDKSKG KVTAAEKAMQ QMD 143
Length:143
Mass (Da):16,454
Last modified:November 22, 2005 - v1
Checksum:i834E354B56013067
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000207 Genomic DNA. Translation: EAN77295.1.
RefSeqiXP_827625.1. XM_822532.1.

Genome annotation databases

EnsemblProtistsiEAN77295; EAN77295; Tb09.211.4850.
GeneIDi3661134.
KEGGitbr:Tb09.211.4850.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000207 Genomic DNA. Translation: EAN77295.1 .
RefSeqi XP_827625.1. XM_822532.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZF7 electron microscopy 5.57 Z 1-143 [» ]
ProteinModelPortali Q38D25.
SMRi Q38D25. Positions 8-118.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5691.Tb09.211.4850.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi EAN77295 ; EAN77295 ; Tb09.211.4850 .
GeneIDi 3661134.
KEGGi tbr:Tb09.211.4850.

Phylogenomic databases

eggNOGi COG0198.
HOGENOMi HOG000216571.
KOi K02898.

Family and domain databases

Gene3Di 2.30.30.30. 1 hit.
InterProi IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR005756. Ribosomal_L26/L24P_euk/arc.
IPR008991. Translation_prot_SH3-like.
[Graphical view ]
PANTHERi PTHR11143. PTHR11143. 1 hit.
Pfami PF00467. KOW. 1 hit.
[Graphical view ]
SMARTi SM00739. KOW. 1 hit.
[Graphical view ]
SUPFAMi SSF50104. SSF50104. 1 hit.
TIGRFAMsi TIGR01080. rplX_A_E. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  2. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ38D25_TRYB2
AccessioniPrimary (citable) accession number: Q38D25
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: May 14, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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