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Q38CY7 (Q38CY7_TRYB2) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal protein L15 RuleBase RU000663
Gene names
ORF Names:Tb09.244.2720 EMBL EAN77333.1
OrganismTrypanosoma brucei brucei (strain 927/4 GUTat10.1) [Reference proteome]
Taxonomic identifier999953 [NCBI]
Taxonomic lineageEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma

Protein attributes

Sequence length221 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L15e family. RuleBase RU000663

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein RuleBase RU000663 EMBL EAN77333.1
   Technical term3D-structure PDB 3ZF7
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q38CY7 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 50F6E4F24C2EF96E

FASTA22126,397
        10         20         30         40         50         60 
MSHSVYYYFT FESSPAPMGS FMYLNELWKK KSSDVMRFIQ RVRAWEFRHQ HTIVRLRRPT 

        70         80         90        100        110        120 
RPEKARMVGY KTKQGYVVFR VRVRRGGRKR PVHKGITYGK PNTAGVLGRK LNKNNRVVAE 

       130        140        150        160        170        180 
QRLGKKYGNL RVLNSYWVNA DSTFLWYEVV AVDPMHRAIR RDPRINWIVN AVHKHREQRG 

       190        200        210        220 
LTSAGRKHRG LRQKGHKASK LRPSRRAAWR RNNRMVFLRK R 

« Hide

References

« Hide 'large scale' references
[1]"The genome of the African trypanosome Trypanosoma brucei."
Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M. expand/collapse author list , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 927/4 GUTat10.1 EMBL EAN77333.1.
[2]"High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000207 Genomic DNA. Translation: EAN77333.1.
RefSeqXP_827663.1. XM_822570.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57Q1-221[»]
ProteinModelPortalQ38CY7.
SMRQ38CY7. Positions 20-191.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING5691.Tb09.244.2720.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsEAN77333; EAN77333; Tb09.244.2720.
GeneID3661201.
KEGGtbr:Tb09.244.2720.

Phylogenomic databases

eggNOGCOG1632.
HOGENOMHOG000229584.
KOK02877.
OMASRRAAWK.

Family and domain databases

Gene3D3.40.1120.10. 1 hit.
InterProIPR024794. Rbsml_L15e_core_dom.
IPR000439. Ribosomal_L15e.
IPR012678. Ribosomal_L23/L15e_core_dom.
[Graphical view]
PANTHERPTHR11847. PTHR11847. 1 hit.
PfamPF00827. Ribosomal_L15e. 1 hit.
[Graphical view]
SUPFAMSSF54189. SSF54189. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ38CY7_TRYB2
AccessionPrimary (citable) accession number: Q38CY7
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)