ID   Q38CD0_TRYB2            Unreviewed;       189 AA.
AC   Q38CD0;
DT   22-NOV-2005, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2005, sequence version 1.
DT   27-MAR-2024, entry version 97.
DE   SubName: Full=60S ribosomal protein L9, putative {ECO:0000313|EMBL:EAN77540.1};
GN   ORFNames=Tb10.70.7010 {ECO:0000313|EMBL:EAN77540.1};
OS   Trypanosoma brucei brucei (strain 927/4 GUTat10.1).
OC   Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina;
OC   Trypanosomatida; Trypanosomatidae; Trypanosoma.
OX   NCBI_TaxID=185431 {ECO:0000313|EMBL:EAN77540.1, ECO:0000313|Proteomes:UP000008524};
RN   [1] {ECO:0000313|EMBL:EAN77540.1, ECO:0000313|Proteomes:UP000008524}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=927/4 GUTat10.1 {ECO:0000313|EMBL:EAN77540.1,
RC   ECO:0000313|Proteomes:UP000008524};
RX   PubMed=16020726; DOI=10.1126/science.1112642;
RA   Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H.,
RA   Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U.,
RA   Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B.,
RA   Alsmark U.C., Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F.,
RA   Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C.,
RA   Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A.,
RA   Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D.,
RA   Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D.,
RA   Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S.,
RA   Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S.,
RA   Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G.,
RA   Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A.,
RA   Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M.,
RA   Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S.,
RA   Walker D., Wanless D., Wang S., White B., White O., Whitehead S.,
RA   Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E.,
RA   Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E.,
RA   Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.;
RT   "The genome of the African trypanosome Trypanosoma brucei.";
RL   Science 309:416-422(2005).
RN   [2] {ECO:0007829|PDB:4V8M}
RP   STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).
RX   PubMed=23395961; DOI=10.1038/nature11872;
RA   Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A.,
RA   Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E.,
RA   Madison-Antenucci S., Frank J.;
RT   "High-resolution cryo-electron microscopy structure of the Trypanosoma
RT   brucei ribosome.";
RL   Nature 494:385-389(2013).
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL6 family.
CC       {ECO:0000256|ARBA:ARBA00009356}.
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DR   EMBL; CM000208; EAN77540.1; -; Genomic_DNA.
DR   RefSeq; XP_822368.1; XM_817275.1.
DR   PDB; 4V8M; EM; 5.57 A; By=1-189.
DR   PDBsum; 4V8M; -.
DR   AlphaFoldDB; Q38CD0; -.
DR   EMDB; EMD-17208; -.
DR   EMDB; EMD-17212; -.
DR   SMR; Q38CD0; -.
DR   IntAct; Q38CD0; 1.
DR   STRING; 185431.Q38CD0; -.
DR   PaxDb; 5691-EAN77540; -.
DR   GeneID; 3662342; -.
DR   KEGG; tbr:Tb10.70.7010; -.
DR   VEuPathDB; TriTrypDB:Tb927.10.1100; -.
DR   eggNOG; KOG3255; Eukaryota.
DR   InParanoid; Q38CD0; -.
DR   OMA; YAHFPMK; -.
DR   OrthoDB; 5486004at2759; -.
DR   Proteomes; UP000008524; Chromosome 10.
DR   GO; GO:0005737; C:cytoplasm; IDA:GeneDB.
DR   GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR   GO; GO:0005730; C:nucleolus; IDA:GeneDB.
DR   GO; GO:0005840; C:ribosome; ISM:GeneDB.
DR   GO; GO:0019843; F:rRNA binding; IEA:InterPro.
DR   GO; GO:0003735; F:structural constituent of ribosome; ISM:GeneDB.
DR   GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR   GO; GO:0042254; P:ribosome biogenesis; ISM:GeneDB.
DR   GO; GO:0006412; P:translation; ISM:GeneDB.
DR   Gene3D; 3.90.930.12; Ribosomal protein L6, alpha-beta domain; 2.
DR   InterPro; IPR000702; Ribosomal_uL6-like.
DR   InterPro; IPR036789; Ribosomal_uL6-like_a/b-dom_sf.
DR   InterPro; IPR020040; Ribosomal_uL6_a/b-dom.
DR   InterPro; IPR002359; Ribosomal_uL6_CS2.
DR   PANTHER; PTHR11655:SF16; 60S RIBOSOMAL PROTEIN L9; 1.
DR   PANTHER; PTHR11655; 60S/50S RIBOSOMAL PROTEIN L6/L9; 1.
DR   Pfam; PF00347; Ribosomal_L6; 2.
DR   PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR   SUPFAM; SSF56053; Ribosomal protein L6; 2.
DR   PROSITE; PS00700; RIBOSOMAL_L6_2; 1.
PE   1: Evidence at protein level;
KW   3D-structure {ECO:0007829|PDB:4V8M};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008524};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW   ECO:0000313|EMBL:EAN77540.1}.
FT   DOMAIN          11..85
FT                   /note="Large ribosomal subunit protein uL6 alpha-beta"
FT                   /evidence="ECO:0000259|Pfam:PF00347"
FT   DOMAIN          97..176
FT                   /note="Large ribosomal subunit protein uL6 alpha-beta"
FT                   /evidence="ECO:0000259|Pfam:PF00347"
SQ   SEQUENCE   189 AA;  21857 MW;  E9DF621DED4CA21E CRC64;
     MKIKSHDQIT FPEDVTVSVK DRIVTVKGKR GTLTKDLRHL QLDFRVNKKL RTFTAVRWFG
     NKINNSTINT ALSHVRNMIT GVTKGFRFKV RFAYAHFPIS VTVENQLVEI RNFLGEKRVR
     RQVVADDVKV YRTDAALVKD ELVLEGNDLE QVSREAAVMH QLCLVKKKDI RKFLDGIYVQ
     TKTNIEVDE
//