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Q38AW9

- Q38AW9_TRYB2

UniProt

Q38AW9 - Q38AW9_TRYB2

Protein
Submitted name:

60S ribosomal protein L37a, putative

Gene

Tb10.100.0110

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    60S ribosomal protein L37a, putativeImported
    Submitted name:
    60S ribosomal proteins L37, putativeImported
    Gene namesi
    ORF Names:Tb10.100.0110Imported, Tb10.70.0465Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 10

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb10.70.0465.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57o1-93[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1997.
    HOGENOMiHOG000229493.
    KOiK02921.
    OMAiCVGIWSC.

    Family and domain databases

    Gene3Di2.20.25.30. 1 hit.
    HAMAPiMF_00327. Ribosomal_L37Ae.
    InterProiIPR002674. Ribosomal_L37ae.
    IPR011331. Ribosomal_L37ae/L37e.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view]
    PfamiPF01780. Ribosomal_L37ae. 1 hit.
    [Graphical view]
    SUPFAMiSSF57829. SSF57829. 1 hit.
    TIGRFAMsiTIGR00280. L37a. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q38AW9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKRTVKMGV MGRYGARYGS NPRKRAKKLE VSQHAKHFCS FCGKFAFRRK   50
    AVGIWRCDGC SKTVAGGAYT LSTPNNTTVR STVRRLRELK QSN 93
    Length:93
    Mass (Da):10,458
    Last modified:November 22, 2005 - v1
    Checksum:iD36F223128922028
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000208 Genomic DNA. Translation: EAN77454.1.
    CM000208 Genomic DNA. Translation: EAN78051.1.
    RefSeqiXP_822282.1. XM_817189.1.
    XP_822879.1. XM_817786.1.

    Genome annotation databases

    EnsemblProtistsiEAN77454; EAN77454; Tb10.100.0110.
    EAN78051; EAN78051; Tb10.70.0465.
    GeneIDi3661479.
    3662977.
    KEGGitbr:Tb10.100.0110.
    tbr:Tb10.70.0465.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000208 Genomic DNA. Translation: EAN77454.1 .
    CM000208 Genomic DNA. Translation: EAN78051.1 .
    RefSeqi XP_822282.1. XM_817189.1.
    XP_822879.1. XM_817786.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 o 1-93 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb10.70.0465.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAN77454 ; EAN77454 ; Tb10.100.0110 .
    EAN78051 ; EAN78051 ; Tb10.70.0465 .
    GeneIDi 3661479.
    3662977.
    KEGGi tbr:Tb10.100.0110.
    tbr:Tb10.70.0465.

    Phylogenomic databases

    eggNOGi COG1997.
    HOGENOMi HOG000229493.
    KOi K02921.
    OMAi CVGIWSC.

    Family and domain databases

    Gene3Di 2.20.25.30. 1 hit.
    HAMAPi MF_00327. Ribosomal_L37Ae.
    InterProi IPR002674. Ribosomal_L37ae.
    IPR011331. Ribosomal_L37ae/L37e.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view ]
    Pfami PF01780. Ribosomal_L37ae. 1 hit.
    [Graphical view ]
    SUPFAMi SSF57829. SSF57829. 1 hit.
    TIGRFAMsi TIGR00280. L37a. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ38AW9_TRYB2
    AccessioniPrimary (citable) accession number: Q38AW9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3