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Q389K1

- Q389K1_TRYB2

UniProt

Q389K1 - Q389K1_TRYB2

Protein
Submitted name:

60S ribosomal protein L6, putative

Gene

Tb10.26.0560

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    60S ribosomal protein L6, putativeImported
    Gene namesi
    ORF Names:Tb10.26.0560Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 10

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb10.26.0560.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57v1-192[»]
    ProteinModelPortaliQ389K1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2163.
    HOGENOMiHOG000207317.
    KOiK02934.
    OMAiEHINDEY.

    Family and domain databases

    Gene3Di2.30.30.30. 1 hit.
    InterProiIPR000915. 60S_ribosomal_L6E.
    IPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view]
    PANTHERiPTHR10715. PTHR10715. 1 hit.
    PfamiPF01159. Ribosomal_L6e. 1 hit.
    [Graphical view]
    SMARTiSM00739. KOW. 1 hit.
    [Graphical view]
    SUPFAMiSSF50104. SSF50104. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q389K1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPAATKKAVE KKAKKVSRKS PEYSTVRKSC KPGTIAIILA GRFRGRRAVI    50
    LKQLPKNGPL VISGPMKYSG VPIRRIDSRY IIATSTRVDL TGVDTSAITP 100
    EIFKREKKEK RVKSEGEFMG DKDKKKAESK AKKTSKAAPK GTVSDERAQL 150
    QNAIDTALIQ AIKKDPLGKE MAGYLHSVFT IKPGDAPHRL KW 192
    Length:192
    Mass (Da):21,185
    Last modified:November 22, 2005 - v1
    Checksum:i41992219B4B00771
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000208 Genomic DNA. Translation: EAN78519.1.
    RefSeqiXP_823347.1. XM_818254.1.

    Genome annotation databases

    EnsemblProtistsiEAN78519; EAN78519; Tb10.26.0560.
    GeneIDi3661624.
    KEGGitbr:Tb10.26.0560.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000208 Genomic DNA. Translation: EAN78519.1 .
    RefSeqi XP_823347.1. XM_818254.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 v 1-192 [» ]
    ProteinModelPortali Q389K1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb10.26.0560.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAN78519 ; EAN78519 ; Tb10.26.0560 .
    GeneIDi 3661624.
    KEGGi tbr:Tb10.26.0560.

    Phylogenomic databases

    eggNOGi COG2163.
    HOGENOMi HOG000207317.
    KOi K02934.
    OMAi EHINDEY.

    Family and domain databases

    Gene3Di 2.30.30.30. 1 hit.
    InterProi IPR000915. 60S_ribosomal_L6E.
    IPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view ]
    PANTHERi PTHR10715. PTHR10715. 1 hit.
    Pfami PF01159. Ribosomal_L6e. 1 hit.
    [Graphical view ]
    SMARTi SM00739. KOW. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50104. SSF50104. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    2. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ389K1_TRYB2
    AccessioniPrimary (citable) accession number: Q389K1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3