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Q389K1 (Q389K1_TRYB2) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Tb10.26.0560 EMBL EAN78519.1
OrganismTrypanosoma brucei brucei (strain 927/4 GUTat10.1) [Reference proteome]
Taxonomic identifier999953 [NCBI]
Taxonomic lineageEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma

Protein attributes

Sequence length192 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein EMBL EAN78519.1
   Technical term3D-structure PDB 3ZF7
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q389K1 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 41992219B4B00771

FASTA19221,185
        10         20         30         40         50         60 
MPAATKKAVE KKAKKVSRKS PEYSTVRKSC KPGTIAIILA GRFRGRRAVI LKQLPKNGPL 

        70         80         90        100        110        120 
VISGPMKYSG VPIRRIDSRY IIATSTRVDL TGVDTSAITP EIFKREKKEK RVKSEGEFMG 

       130        140        150        160        170        180 
DKDKKKAESK AKKTSKAAPK GTVSDERAQL QNAIDTALIQ AIKKDPLGKE MAGYLHSVFT 

       190 
IKPGDAPHRL KW 

« Hide

References

« Hide 'large scale' references
[1]"The genome of the African trypanosome Trypanosoma brucei."
Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M. expand/collapse author list , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 927/4 GUTat10.1 EMBL EAN78519.1.
[2]"High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000208 Genomic DNA. Translation: EAN78519.1.
RefSeqXP_823347.1. XM_818254.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57v1-192[»]
ProteinModelPortalQ389K1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING5691.Tb10.26.0560.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsEAN78519; EAN78519; Tb10.26.0560.
GeneID3661624.
KEGGtbr:Tb10.26.0560.

Phylogenomic databases

eggNOGCOG2163.
HOGENOMHOG000207317.
KOK02934.
OMAEAEFFNE.
ProtClustDBCLSZ2437031.

Family and domain databases

Gene3D2.30.30.30. 1 hit.
InterProIPR000915. 60S_ribosomal_L6E.
IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERPTHR10715. PTHR10715. 1 hit.
PfamPF01159. Ribosomal_L6e. 1 hit.
[Graphical view]
SMARTSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMSSF50104. SSF50104. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ389K1_TRYB2
AccessionPrimary (citable) accession number: Q389K1
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: November 13, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)