Reviewed, UniProtKB/Swiss-Prot Q38847 (AGL15_ARATH)

Names and origin

Protein names

Recommended name:
    Agamous-like MADS-box protein AGL15

Gene names

Name:	AGL15
Ordered Locus Names:	At5g13790
ORF Names:	MXE10.6

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	268 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Function	Probable transcription factor.
Subcellular location	Nucleus.
Developmental stage	Highly expressed in developing embryos.
Sequence similarities	Contains 1 K-box domain. Contains 1 MADS-box domain.

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Cellular component	Nucleus
Ligand	DNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Traceable author statement. Source: TAIR nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	protein binding Inferred from physical interaction. Source: IntAct sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
AGL14	Q38838	1	EBI-622076,EBI-622067
AGL21	Q9SZJ6	1	EBI-622076,EBI-621986
CALM	P62157	1	EBI-622076,EBI-397403	From a different organism.
CAM1	P25854	1	EBI-622076,EBI-1235664
CAM7	P59220	1	EBI-622076,EBI-1236031
CML10	P30187	1	EBI-622076,EBI-1238722
CML9	Q9S744	1	EBI-622076,EBI-1236048

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 268	268	Agamous-like MADS-box protein AGL15		PRO_0000199474
Regions
	Domain	3 – 57	55	MADS-box
	Domain	80 – 170	91	K-box

Sequences

	Sequence		Length	Mass (Da)
	Q38847-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: E1964D083614220D	FASTA	268	30,329
	10 20 30 40 50 60 MGRGKIEIKR IENANSRQVT FSKRRSGLLK KARELSVLCD AEVAVIVFSK SGKLFEYSST 70 80 90 100 110 120 GMKQTLSRYG NHQSSSASKA EEDCAEVDIL KDQLSKLQEK HLQLQGKGLN PLTFKELQSL 130 140 150 160 170 180 EQQLYHALIT VRERKERLLT NQLEESRLKE QRAELENETL RRQVQELRSF LPSFTHYVPS 190 200 210 220 230 240 YIKCFAIDPK NALINHDSKC SLQNTDSDTT LQLGLPGEAH DRRTNEGERE SPSSDSVTTN 250 260 TSSETAERGD QSSLANSPPE AKRQRFSV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"AGL15, a MADS domain protein expressed in developing embryos." Heck G.R., Perry S.E., Nichols K.N., Fernandez D.E. Plant Cell 7:1271-1282(1995) [PubMed: 7549483] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: cv. Wassilewskija.
[2]	"Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence features of the regions of 1,381,565 bp covered by twenty one physically assigned P1 and TAC clones." Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N., Tabata S. DNA Res. 5:131-145(1998) [PubMed: 9679202] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	"Diverse roles for MADS box genes in Arabidopsis development." Rounsley S.D., Ditta G.S., Yanofsky M.F. Plant Cell 7:1259-1269(1995) [PubMed: 7549482] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 7-268. Strain: cv. Landsberg erecta. Tissue: Flower.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U22528 Genomic DNA. Translation: AAA65653.1. AB011484, AB005230 Genomic DNA. Translation: BAB10600.1. U20185 mRNA. Translation: AAC49083.1.
IPI	IPI00536362.
PIR	S71200.
RefSeq	NP_196883.1.
UniGene	At.28675
3D structure databases
HSSP	HSSP built from PDB template 1EGW based on UniProtKB Q02078.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q38847. 8 interactions.
Genome annotation databases
GeneID	831224.
GenomeReviews	Gene locus AT5G13790 in contig BA000015_GR.
KEGG	ath:AT5G13790.
NMPDR	fig|3702.1.peg.23503.
Organism-specific databases
GeneFarm	3513. 357.
TAIR	At5g13790.
Phylogenomic databases
OMA	Q38847. RIENANS.
Gene expression databases
ArrayExpress	Q38847.
GermOnline	AT5G13790. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR002487. TF_Kbox. IPR002100. TF_MADSbox. [Graphical view]
Pfam	PF01486. K-box. 1 hit. PF00319. SRF-TF. 1 hit. [Graphical view]
PRINTS	PR00404. MADSDOMAIN.
SMART	SM00432. MADS. 1 hit. [Graphical view]
PROSITE	PS51297. K_BOX. 1 hit. PS00350. MADS_BOX_1. 1 hit. PS50066. MADS_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

AGL15_ARATH

Accession

Primary (citable) accession number: Q38847
Secondary accession number(s): Q38839

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 15, 1998
Last sequence update:	November 1, 1996
Last modified:	June 16, 2009
This is version 70 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)