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Q38804

- MT1C_ARATH

UniProt

Q38804 - MT1C_ARATH

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Protein

Metallothionein-like protein 1C

Gene

MT1C

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Metallothioneins have a high content of cysteine residues that bind various heavy metals.

GO - Molecular functioni

  1. copper ion binding Source: TAIR

GO - Biological processi

  1. response to copper ion Source: TAIR
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Metal-thiolate cluster

Names & Taxonomyi

Protein namesi
Recommended name:
Metallothionein-like protein 1C
Short name:
MT-1C
Gene namesi
Name:MT1C
Ordered Locus Names:At1g07610
ORF Names:F22G5_34, F24B9.33
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G07610.

Subcellular locationi

GO - Cellular componenti

  1. cytosolic ribosome Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 4545Metallothionein-like protein 1CPRO_0000197421Add
BLAST

Proteomic databases

PRIDEiQ38804.

Expressioni

Gene expression databases

GenevestigatoriQ38804.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G07610.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ38804.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000113674.
OMAiTINNCYI.

Sequencei

Sequence statusi: Complete.

Q38804-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40
MAGSNCGCGS SCKCGDSCSC EKNYNKECDN CSCGSNCSCG SSCNC
Length:45
Mass (Da):4,495
Last modified:November 1, 1996 - v1
Checksum:iB8AD2F783C3C25D2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U11255 Genomic DNA. Translation: AAA82211.1.
AC007583 Genomic DNA. Translation: AAF75097.1.
CP002684 Genomic DNA. Translation: AEE28148.1.
AF375400 mRNA. Translation: AAK52984.1.
AY142056 mRNA. Translation: AAM98320.1.
AY085074 mRNA. Translation: AAM61630.1.
PIRiS57860.
RefSeqiNP_172240.1. NM_100634.1.
UniGeneiAt.28737.

Genome annotation databases

EnsemblPlantsiAT1G07610.1; AT1G07610.1; AT1G07610.
GeneIDi837274.
KEGGiath:AT1G07610.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U11255 Genomic DNA. Translation: AAA82211.1 .
AC007583 Genomic DNA. Translation: AAF75097.1 .
CP002684 Genomic DNA. Translation: AEE28148.1 .
AF375400 mRNA. Translation: AAK52984.1 .
AY142056 mRNA. Translation: AAM98320.1 .
AY085074 mRNA. Translation: AAM61630.1 .
PIRi S57860.
RefSeqi NP_172240.1. NM_100634.1.
UniGenei At.28737.

3D structure databases

ProteinModelPortali Q38804.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT1G07610.1-P.

Proteomic databases

PRIDEi Q38804.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G07610.1 ; AT1G07610.1 ; AT1G07610 .
GeneIDi 837274.
KEGGi ath:AT1G07610.

Organism-specific databases

TAIRi AT1G07610.

Phylogenomic databases

HOGENOMi HOG000113674.
OMAi TINNCYI.

Gene expression databases

Genevestigatori Q38804.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structure, organization and expression of the metallothionein gene family in Arabidopsis."
    Zhou J., Goldsbrough P.B.
    Mol. Gen. Genet. 248:318-328(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Columbia.
  2. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  4. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  5. "Full-length cDNA from Arabidopsis thaliana."
    Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiMT1C_ARATH
AccessioniPrimary (citable) accession number: Q38804
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: October 1, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Metallothioneins
    Classification of metallothioneins and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3