Q38777 (Q38777_ALLSA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitinase EMBL AAA32641.1

Gene names

Name:

chitinase EMBL AAA32641.1

Organism

Allium sativum (Garlic) EMBL AAA32641.1

Taxonomic identifier

4682 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › Asparagales › Amaryllidaceae › Allioideae › Allieae › Allium

Protein attributes

Sequence length	318 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410

Ontologies

Keywords
Domain	Signal EMBL AAA32641.1
Ligand	Chitin-binding RuleBase RU000410 SAAS SAAS001002
PTM	Disulfide bond SAAS SAAS001002
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	chitin binding Inferred from electronic annotation. Source: UniProtKB-KW chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 17	17	Potential EMBL AAA32641.1
	Chain	18 – ›318	›301	chitinase EMBL AAA32641.1		PRO_5000143841
Experimental info
	Non-terminal residue	318	1	EMBL AAA32641.1

Sequences

	Sequence		Length	Mass (Da)
	Q38777 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 097C3DBD772468D4	FASTA	318	33,176
	10 20 30 40 50 60 FLVTTILAFA LFKNSYAQQC GSQAGGALCS NRLCCSKFGY CGSTDPYCGT GCQSQCGGGG 70 80 90 100 110 120 GGGGGRGGGG GGGGGSGVAS IISSSLFNQM LLHRNDAACP ANGFYTYDAF IAAANSFGGF 130 140 150 160 170 180 GTTGDINAQK RELAAFFAQT SHETTGGYPS APDGPYAWGY CFKQEQGNPS DYCQASAQYP 190 200 210 220 230 240 CAPGKKYYGR GPIQISYNYN YGQCGNAIHQ DLLNNPDLVA TDPTISFKTA IWFWMTAQSP 250 260 270 280 290 300 KPSCHAVATG QWQPSAADQA AGRVPGFGVI TNIINGGVEC GHGSDTHVAD RIGYYKRYCD 310 LLQVGYGDNL DCGNQAHF

References

[1]	"Isolation and characterization of two different chitinase cDNA clones from garlic (Allium sativum L.) shoots." van Damme E.J.M., Willems P., Peumans W. Submitted (MAY-1992) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	M94105 mRNA. Translation: AAA32641.1.
3D structure databases
HSSP	HSSP built from PDB template 2BAA based on UniProtKB P23951.
ProteinModelPortal	Q38777.
ModBase	Search...
Protein family/group databases
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
Gene3D	3.30.60.10. 1 hit.
InterPro	IPR001002. Chitin-bd_1. IPR018371. Chitin-binding_1_CS. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. IPR023346. Lysozyme-like_dom. [Graphical view]
Pfam	PF00187. Chitin_bind_1. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
PRINTS	PR00451. CHITINBINDNG.
ProDom	PD000609. Chitin_bd_1. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00270. ChtBD1. 1 hit. [Graphical view]
SUPFAM	SSF57016. Chitin_bd_1. 1 hit. SSF53955. SSF53955. 1 hit.
PROSITE	PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. PS00773. CHITINASE_19_1. 1 hit. PS00774. CHITINASE_19_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q38777_ALLSA

Accession

Primary (citable) accession number: Q38777

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	March 6, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)