Unreviewed, UniProtKB/TrEMBL Q38776 (Q38776_ALLSA)

Names and origin

Protein names

Submitted name:
    Chitinase EMBL AAA32640.1

Gene names

Name:

chitinase EMBL AAA32640.1

Organism

Allium sativum (Garlic) EMBL AAA32640.1

Taxonomic identifier

4682 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Asparagales › Alliaceae › Allium

Protein attributes

Sequence length	302 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410V1

Ontologies

Keywords
Domain	Signal
Ligand	Chitin-binding RuleBase RU000410V1 Spearmint SPM018371
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 17	17	Potential EMBL AAA32640.1
	Chain	18 – ›302	›285	chitinase EMBL AAA32640.1		PRO_5000143842
Experimental info
	Non-terminal residue	302	1	EMBL AAA32640.1

Sequences

	Sequence		Length	Mass (Da)
	Q38776-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: D0687D330BFFD75F	FASTA	302	31,728
	10 20 30 40 50 60 TVLTFALFTN SYAQQCGSQG SGALCSNGLC CSQYGYCGNG GPYCGTGCQS QCGGPGGGSS 70 80 90 100 110 120 GVASIISSSL FNQMLLHRND AACPANGFYT IDAFIAAANS FSGFGTTGDT DTQKRELAAF 130 140 150 160 170 180 FAQTSHETTG GYASAPDGPY AWGYCFKQEQ GNPPDYCQAS AQYPCAPGKK YYGRGPIQIS 190 200 210 220 230 240 YNYNYGQCGN AINQDLLNNP DLVASDPAIS FKTAIWFWMT AQSPKPSCHA VATGQWQPSA 250 260 270 280 290 300 ADQAAGRVPG FGVITNIING GVECGHGSDP SVADRIGFYK RYCDLFQVGY GDNLDCGNQA HF

References

[1]	"Isolation and characterization of two different chitinase cDNA clones from garlic (Allium sativum L.) shoots." van Damme E.J.M., Willems P., Peumans W. Submitted (MAY-1992) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	M94106 mRNA. Translation: AAA32640.1.
3D structure databases
HSSP	HSSP built from PDB template 1CNS based on UniProtKB P23951.
ModBase	Search...
Protein family/group databases
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Family and domain databases
InterPro	IPR018371. Chitin-binding_1_CS. IPR001002. Chitin_bd_1. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. [Graphical view]
Gene3D	G3DSA:3.30.60.10. Chitin_bd_1. 1 hit.
PANTHER	PTHR22595. Glyco_hydro_19_cat. 1 hit.
Pfam	PF00187. Chitin_bind_1. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
PRINTS	PR00451. CHITINBINDNG.
ProDom	PD000609. Chitin_binding_1. 1 hit. PD354900. Glyco_hydro_19. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00270. ChtBD1. 1 hit. [Graphical view]
PROSITE	PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. PS00773. CHITINASE_19_1. 1 hit. PS00774. CHITINASE_19_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q38776_ALLSA

Accession

Primary (citable) accession number: Q38776

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	April 14, 2009
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)