Unreviewed,
UniProtKB/TrEMBL Q38776 (Q38776_ALLSA)
Last modified
April 14, 2009.
Version 42.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Chitinase EMBL AAA32640.1 | ||
| Gene names |
| ||
| Organism | Allium sativum (Garlic) EMBL AAA32640.1 | ||
| Taxonomic identifier | 4682 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Asparagales › Alliaceae › Allium |
Protein attributes
| Sequence length | 302 AA. |
| Sequence status | Fragment. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Sequence similarities | Contains 1 chitin-binding type-1 domain. RuleBase RU000410V1 |
Ontologies
| Keywords | |
|---|---|
| Domain | Signal |
| Ligand | Chitin-binding RuleBase RU000410V1 Spearmint SPM018371 |
| Gene Ontology (GO) | |
| Biological process | cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic processInferred from electronic annotation. Source: InterPro |
| Molecular function | chitin binding Inferred from electronic annotation. Source: InterPro chitinase activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 17 | 17 | Potential EMBL AAA32640.1 | |||||
| Chain | 18 – ›302 | ›285 | chitinase EMBL AAA32640.1 | PRO_5000143842 | ||||
Experimental info | ||||||||
| Non-terminal residue | 302 | 1 | EMBL AAA32640.1 | |||||
Sequences
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References
| [1] | "Isolation and characterization of two different chitinase cDNA clones from garlic (Allium sativum L.) shoots." van Damme E.J.M., Willems P., Peumans W. Submitted (MAY-1992) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| M94106 mRNA. Translation: AAA32640.1. | |
3D structure databases | |
| HSSP | HSSP built from PDB template 1CNS based on UniProtKB P23951. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19. |
Family and domain databases | |
| InterPro | IPR018371. Chitin-binding_1_CS. IPR001002. Chitin_bd_1. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. [Graphical view] |
| Gene3D | G3DSA:3.30.60.10. Chitin_bd_1. 1 hit. |
| PANTHER | PTHR22595. Glyco_hydro_19_cat. 1 hit. |
| Pfam | PF00187. Chitin_bind_1. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view] |
| PIRSF | PIRSF001060. Endochitinase. 1 hit. |
| PRINTS | PR00451. CHITINBINDNG. |
| ProDom | PD000609. Chitin_binding_1. 1 hit. PD354900. Glyco_hydro_19. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| SMART | SM00270. ChtBD1. 1 hit. [Graphical view] |
| PROSITE | PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. PS00773. CHITINASE_19_1. 1 hit. PS00774. CHITINASE_19_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q38776_ALLSA | ||||||||
| Accession | Primary (citable) accession number: Q38776 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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