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Protein
Submitted name:

DEFH49 protein

Gene

DEFH49

Organism
Antirrhinum majus (Garden snapdragon)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
DEFH49 proteinImported
Gene namesi
Name:DEFH49Imported
OrganismiAntirrhinum majus (Garden snapdragon)Imported
Taxonomic identifieri4151 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsLamialesPlantaginaceaeAntirrhineaeAntirrhinum

Subcellular locationi

  • Nucleus PROSITE-ProRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

IntActiQ38734. 2 interactors.

Structurei

3D structure databases

ProteinModelPortaliQ38734.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61
Domaini88 – 178K-boxInterPro annotationAdd BLAST91

Family and domain databases

CDDicd00265. MADS_MEF2_like. 1 hit.
InterProiView protein in InterPro
IPR033896. MADS_MEF2-like.
IPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
PfamiView protein in Pfam
PF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS51297. K_BOX. 1 hit.
PS00350. MADS_BOX_1. 1 hit.
PS50066. MADS_BOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q38734-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN
60 70 80 90 100
RGKLYEFCSS SNMLKTIERY QKSSYGSLEV NHQAKDIEAS SYKEYLKLKS
110 120 130 140 150
KYESLQGYQR HLLGDDLGPL NMNDLEHLEH QLETSLKHIR STRTQVMLDQ
160 170 180 190 200
LSDLQTKEKM MVDANKALER KLEEIYAANH LQQSWGGGGD HSNAYNDHQH
210 220 230 240
AQSQGFFQPL ECNSTLQIGF NDPVASSQMT APTDAQNMHG LVPGWML
Length:247
Mass (Da):28,180
Last modified:November 1, 1996 - v1
Checksum:iAC6FCA1C827F17D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X95467 mRNA. Translation: CAA64741.1.
PIRiS78015.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X95467 mRNA. Translation: CAA64741.1.
PIRiS78015.

3D structure databases

ProteinModelPortaliQ38734.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ38734. 2 interactors.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

CDDicd00265. MADS_MEF2_like. 1 hit.
InterProiView protein in InterPro
IPR033896. MADS_MEF2-like.
IPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
PfamiView protein in Pfam
PF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS51297. K_BOX. 1 hit.
PS00350. MADS_BOX_1. 1 hit.
PS50066. MADS_BOX_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ38734_ANTMA
AccessioniPrimary (citable) accession number: Q38734
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 15, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.