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Q386L1

- Q386L1_TRYB2

UniProt

Q386L1 - Q386L1_TRYB2

Protein

Ribosomal protein L37

Gene

Tb09.211.0865

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Binds to the 23S rRNA.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. rRNA binding Source: UniProtKB-KW
    3. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Keywords - Ligandi

    Metal-bindingUniRule annotation, RNA-binding, rRNA-bindingUniRule annotation, ZincUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribosomal protein L37UniRule annotation
    Gene namesi
    ORF Names:Tb09.211.0865Imported, Tb11.02.0500Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 11 Scaffold 1, UP000008524: Chromosome 9

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb11.02.0500.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57n1-84[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L37e family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2126.
    HOGENOMiHOG000111076.
    KOiK02922.
    OMAiYPAAKMR.

    Family and domain databases

    Gene3Di2.20.25.30. 1 hit.
    InterProiIPR011331. Ribosomal_L37ae/L37e.
    IPR001569. Ribosomal_L37e.
    IPR018267. Ribosomal_L37e_CS.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view]
    PANTHERiPTHR10768. PTHR10768. 1 hit.
    PfamiPF01907. Ribosomal_L37e. 1 hit.
    [Graphical view]
    ProDomiPD005132. Ribosomal_L37e. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF57829. SSF57829. 1 hit.
    PROSITEiPS01077. RIBOSOMAL_L37E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q386L1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTKGTTSMGQ RHGRTHILCR RCGRNAYHVQ WERCAACAYP RAQRRRYNWS   50
    VKAIKRRRTG TGRCRYLKVV HRRIRNHFKT DIKA 84
    Length:84
    Mass (Da):10,100
    Last modified:November 22, 2005 - v1
    Checksum:i1CA07F2E4822700F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000207 Genomic DNA. Translation: EAN76901.1.
    CH464491 Genomic DNA. Translation: EAN79270.1.
    RefSeqiXP_827231.1. XM_822138.1.
    XP_828382.1. XM_823289.1.

    Genome annotation databases

    EnsemblProtistsiEAN76901; EAN76901; Tb09.211.0865.
    EAN79270; EAN79270; Tb11.02.0500.
    GeneIDi3660620.
    3664025.
    KEGGitbr:Tb09.211.0865.
    tbr:Tb11.02.0500.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000207 Genomic DNA. Translation: EAN76901.1 .
    CH464491 Genomic DNA. Translation: EAN79270.1 .
    RefSeqi XP_827231.1. XM_822138.1.
    XP_828382.1. XM_823289.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 n 1-84 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb11.02.0500.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAN76901 ; EAN76901 ; Tb09.211.0865 .
    EAN79270 ; EAN79270 ; Tb11.02.0500 .
    GeneIDi 3660620.
    3664025.
    KEGGi tbr:Tb09.211.0865.
    tbr:Tb11.02.0500.

    Phylogenomic databases

    eggNOGi COG2126.
    HOGENOMi HOG000111076.
    KOi K02922.
    OMAi YPAAKMR.

    Family and domain databases

    Gene3Di 2.20.25.30. 1 hit.
    InterProi IPR011331. Ribosomal_L37ae/L37e.
    IPR001569. Ribosomal_L37e.
    IPR018267. Ribosomal_L37e_CS.
    IPR011332. Ribosomal_zn-bd.
    [Graphical view ]
    PANTHERi PTHR10768. PTHR10768. 1 hit.
    Pfami PF01907. Ribosomal_L37e. 1 hit.
    [Graphical view ]
    ProDomi PD005132. Ribosomal_L37e. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF57829. SSF57829. 1 hit.
    PROSITEi PS01077. RIBOSOMAL_L37E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ386L1_TRYB2
    AccessioniPrimary (citable) accession number: Q386L1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3