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Protein

40S ribosomal protein S4

Gene

Tb11.02.1085

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • protein complex binding Source: GeneDB
  • RNA binding Source: GO_Central
  • rRNA binding Source: UniProtKB-UniRule
  • structural constituent of ribosome Source: GO_Central

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S4UniRule annotation
Gene namesi
ORF Names:Tb11.02.1085Imported, Tb11.02.1090Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
Proteomesi
  • UP000008524 Componenti: Chromosome 11 Scaffold 1

Subcellular locationi

GO - Cellular componenti

Interactioni

GO - Molecular functioni

  • protein complex binding Source: GeneDB

Protein-protein interaction databases

STRINGi5691.EAN79329.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V8Melectron microscopy5.57A11-273[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini39 – 102S4 RNA-bindingInterPro annotationAdd BLAST64

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS4 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000231325.
KOiK02987.

Family and domain databases

CDDicd00165. S4. 1 hit.
Gene3Di3.10.290.10. 1 hit.
HAMAPiMF_00485. Ribosomal_S4e. 1 hit.
InterProiView protein in InterPro
IPR032277. 40S_S4_C.
IPR005824. KOW.
IPR000876. Ribosomal_S4e.
IPR013845. Ribosomal_S4e_central_region.
IPR013843. Ribosomal_S4e_N.
IPR002942. S4_RNA-bd.
IPR036986. S4_RNA-bd_sf.
PANTHERiPTHR11581. PTHR11581. 1 hit.
PfamiView protein in Pfam
PF16121. 40S_S4_C. 1 hit.
PF00467. KOW. 1 hit.
PF00900. Ribosomal_S4e. 1 hit.
PF08071. RS4NT. 1 hit.
PF01479. S4. 1 hit.
PIRSFiPIRSF002116. Ribosomal_S4. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002667. Ribosomal_S4e_central. 1 hit.
SMARTiView protein in SMART
SM00739. KOW. 1 hit.
SM00363. S4. 1 hit.
PROSITEiView protein in PROSITE
PS50889. S4. 1 hit.

Sequencei

Sequence statusi: Complete.

Q386F2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKKHLKRLY APKDWMLSKL TGVFAPRPRA GPHKLRECLS LLIIIRNRLK
60 70 80 90 100
YALNALEAQM ILRQGLVCVD GKPRKDGKYP AGFMDVVEIP KTGDRFRILY
110 120 130 140 150
DVKGRFALVR VSEAESSIKM MKVVNVYTGT GRIPVAVTHD GHRIRYPDPR
160 170 180 190 200
TSRGDTLVYD VKEKKVLDLI KIGNGKVVMV TGGANRGRIG EIVSIERHPG
210 220 230 240 250
AFDIARLKDA SGHEFATRAT NIFVIGKDMS SVPVTLPKQQ GLRINVIQER
260 270
EEKLIAAETR RTTQAHSKRK TKV
Length:273
Mass (Da):30,644
Last modified:November 22, 2005 - v1
Checksum:iCAAA858CC7C17982
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH464491 Genomic DNA. Translation: EAN79328.1.
CH464491 Genomic DNA. Translation: EAN79329.1.
RefSeqiXP_828440.1. XM_823347.1.
XP_828441.1. XM_823348.1.

Genome annotation databases

EnsemblProtistsiEPrT00001295197; EPrP00001312351; EPrG00001285465.
EPrT00001297317; EPrP00001313411; EPrG00001286525.
GeneDBiTb927.11.3590:pep.
Tb927.11.3600:pep.
GeneIDi3664994.
3664995.
KEGGitbr:Tb11.02.1085.
tbr:Tb11.02.1090.

Similar proteinsi

Entry informationi

Entry nameiQ386F2_TRYB2
AccessioniPrimary (citable) accession number: Q386F2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: October 25, 2017
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported