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Q385T6

- Q385T6_TRYB2

UniProt

Q385T6 - Q385T6_TRYB2

Protein
Submitted name:

60S ribosomal protein L17, putative

Gene

Tb10.61.2090

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    60S ribosomal protein L17, putativeImported
    Gene namesi
    ORF Names:Tb10.61.2090Imported, Tb11.02.2430Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 10, UP000008524: Chromosome 11 Scaffold 1

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb11.02.2430.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57R1-166[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L22P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0091.
    HOGENOMiHOG000205045.
    KOiK02880.
    OMAiEANADHQ.

    Family and domain databases

    Gene3Di3.90.470.10. 1 hit.
    InterProiIPR001063. Ribosomal_L22.
    IPR018260. Ribosomal_L22/L17_CS.
    IPR005721. Ribosomal_L22/L17_euk/arc.
    [Graphical view]
    PANTHERiPTHR11593. PTHR11593. 1 hit.
    PfamiPF00237. Ribosomal_L22. 1 hit.
    [Graphical view]
    SUPFAMiSSF54843. SSF54843. 1 hit.
    TIGRFAMsiTIGR01038. L22_arch. 1 hit.
    PROSITEiPS00464. RIBOSOMAL_L22. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q385T6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVHYSRKPQV SSKTAKAKIA DLRCHYKNTF ETANVINGMK LRKAQQLYRQ    50
    VLAKTRCIPF KRYNGKIGNT AQAKEWGQTK GRWPRKSVVA MLSLLKNAEA 100
    NAIEKGLDPG KMVIKHVQVD QAPRVRRRTF RAHGRITPYM RSPCHVQLFM 150
    TQPQERVPVP KSKPKK 166
    Length:166
    Mass (Da):19,106
    Last modified:November 22, 2005 - v1
    Checksum:i7319361236EA49A0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000208 Genomic DNA. Translation: EAN78825.1.
    CH464491 Genomic DNA. Translation: EAN79445.1.
    RefSeqiXP_827937.1. XM_822844.1.
    XP_828557.1. XM_823464.1.

    Genome annotation databases

    EnsemblProtistsiEAN78825; EAN78825; Tb10.61.2090.
    EAN79445; EAN79445; Tb11.02.2430.
    GeneIDi3661778.
    3664907.
    KEGGitbr:Tb10.61.2090.
    tbr:Tb11.02.2430.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000208 Genomic DNA. Translation: EAN78825.1 .
    CH464491 Genomic DNA. Translation: EAN79445.1 .
    RefSeqi XP_827937.1. XM_822844.1.
    XP_828557.1. XM_823464.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 R 1-166 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb11.02.2430.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAN78825 ; EAN78825 ; Tb10.61.2090 .
    EAN79445 ; EAN79445 ; Tb11.02.2430 .
    GeneIDi 3661778.
    3664907.
    KEGGi tbr:Tb10.61.2090.
    tbr:Tb11.02.2430.

    Phylogenomic databases

    eggNOGi COG0091.
    HOGENOMi HOG000205045.
    KOi K02880.
    OMAi EANADHQ.

    Family and domain databases

    Gene3Di 3.90.470.10. 1 hit.
    InterProi IPR001063. Ribosomal_L22.
    IPR018260. Ribosomal_L22/L17_CS.
    IPR005721. Ribosomal_L22/L17_euk/arc.
    [Graphical view ]
    PANTHERi PTHR11593. PTHR11593. 1 hit.
    Pfami PF00237. Ribosomal_L22. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54843. SSF54843. 1 hit.
    TIGRFAMsi TIGR01038. L22_arch. 1 hit.
    PROSITEi PS00464. RIBOSOMAL_L22. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ385T6_TRYB2
    AccessioniPrimary (citable) accession number: Q385T6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3