Q385D9 (Q385D9_TRYB2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
40S ribosomal protein S5, putative EMBL EAN79592.1

Gene names

ORF Names:

Tb11.02.4170 EMBL EAN79592.1

Organism

Trypanosoma brucei brucei (strain 927/4 GUTat10.1) [Reference proteome]

Taxonomic identifier

999953 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Euglenozoa › Kinetoplastida › Trypanosomatidae › Trypanosoma › Trypanozoon › Trypanosoma brucei › Trypanosoma brucei brucei

Protein attributes

Sequence length	190 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S7P family. RuleBase RU003619

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU003619 EMBL EAN79592.1
Technical term	3D-structure PDB 3ZEY Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q385D9 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: 69F86B09F90FA33B	FASTA	190	21,386
	10 20 30 40 50 60 MSAKAPKLFN KWSYENLQTT EIALNDYITR TPTYVPHSAG RWQKKRFRKA RIPIVERLTN 70 80 90 100 110 120 GLMFKGRGNG KKLQAVRLVR HTLEIIHLLT DQNPIQVVID AVSKGAPRED STRVGAGGVV 130 140 150 160 170 180 RRQAVDVSPM RRVNEAIYLM CKGAREAAFR NLKTLPECLA DEIVNASKGS SNSYAIKKKD 190 EVERVAKANR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of the African trypanosome Trypanosoma brucei." Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M. , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A. Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 927/4 GUTat10.1 EMBL EAN79592.1.
[2]	"High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome." Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J. Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CH464491 Genomic DNA. Translation: EAN79592.1.

RefSeq

XP_828704.1. XM_823611.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3ZEY	electron microscopy	5.57	2	1-190	[»]

ProteinModelPortal

Q385D9.

SMR

Q385D9. Positions 41-190.

ModBase

Search...

Protein-protein interaction databases

STRING

5691.Tb11.02.4170.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblProtists

EAN79592; EAN79592; Tb11.02.4170.

GeneID

3665114.

KEGG

tbr:Tb11.02.4170.

Phylogenomic databases

eggNOG

COG0049.

HOGENOM

HOG000039066.

KO

K02989.

ProtClustDB

PTZ00091.

Family and domain databases

Gene3D

1.10.455.10. 1 hit.

InterPro

IPR000235. Ribosomal_S5/S7.
IPR005716. Ribosomal_S5/S7_euk/arc.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]

PANTHER

PTHR11205. PTHR11205. 1 hit.
PTHR11205:SF1. PTHR11205:SF1. 1 hit.

Pfam

PF00177. Ribosomal_S7. 1 hit.
[Graphical view]

PIRSF

PIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.

SUPFAM

SSF47973. Ribosomal_S7. 1 hit.

TIGRFAMs

TIGR01028. S7_S5_E_A. 1 hit.

PROSITE

PS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q385D9_TRYB2

Accession

Primary (citable) accession number: Q385D9

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)