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Protein
Submitted name:

DNA ligase, putative

Gene

Tb11.02.4580

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, putativeImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:Tb11.02.4580Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 11 Scaffold 1

Structurei

3D structure databases

ProteinModelPortaliQ384Z5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG133163.
HOGENOMiHOG000255862.
InParanoidiQ384Z5.

Sequencei

Sequence statusi: Complete.

Q384Z5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFRLVRPRRG LPFEPMALST FDVFERAATA ASPSGSSPQG PPYFVSPKHD
60 70 80 90 100
GVRIVSYVPP QAESTKSTCF SRFGRPIYGV TWIEEELRLL RWLSGDPRLV
110 120 130 140 150
LDGELYIHRS HNPRTASSGA TQTGFLAVSA LVHRLRSAKS ACSSEDEVLR
160 170 180 190 200
YVASLPIMCV FDIVSLQPNE RVKLGGDKSG RGIPRIEKER LAILRGVMEA
210 220 230 240 250
NHISDLEMVR VIPNHSVFSQ RLKALHFLAS LLERARASST LFPERMSSAV
260 270 280 290 300
EECSGAEPVR EPVPAYQGIG GKYVKLVPYT LITSLEEVRT VYLDKYLSTG
310 320 330 340 350
YEGAVVRSAS NVYEIREKEK KVLQGLLDPL ITSLKPSLFA LHSRNESRRN
360 370 380 390 400
GARVTGGTRL LRVHSEGECV VTCDAPGATE TDTSDGNKNG AGSDEAADHR
410 420 430 440 450
EIVEKVLRRA KTNGRRSPTA AKLLPFADKE YAILRPLLKP PTADARSRSF
460 470 480 490 500
LRIPVSSLHE SLGVSAPRTP QGRAAMKGNN SDTVIFYGVQ CLSDTGRVFN
510 520 530 540 550
VSLPKMNAEN QQALLRHLLD VTGGRKGGGT PASGRTNKRS LTGLYATVKY
560 570
QSLTEYGVPR FGQVKGIRGG KGWFV
Length:575
Mass (Da):63,030
Last modified:November 22, 2005 - v1
Checksum:iA43A2048D4942BCD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH464491 Genomic DNA. Translation: EAN79636.1.
RefSeqiXP_828748.1. XM_823655.1.

Genome annotation databases

GeneIDi3665837.
KEGGitbr:Tb11.02.4580.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH464491 Genomic DNA. Translation: EAN79636.1.
RefSeqiXP_828748.1. XM_823655.1.

3D structure databases

ProteinModelPortaliQ384Z5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3665837.
KEGGitbr:Tb11.02.4580.

Phylogenomic databases

eggNOGiNOG133163.
HOGENOMiHOG000255862.
InParanoidiQ384Z5.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.

Entry informationi

Entry nameiQ384Z5_TRYB2
AccessioniPrimary (citable) accession number: Q384Z5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: March 4, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.