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Q38420

- Q38420_BPP1

UniProt

Q38420 - Q38420_BPP1

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Protein
Submitted name:

ParB

Gene

parB

Organism
Enterobacteria phage P1 (Bacteriophage P1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei214 – 2141Citrate 2Imported

GO - Molecular functioni

  1. DNA binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
ParBImported
Gene namesi
Name:parBImported
OrganismiEnterobacteria phage P1 (Bacteriophage P1)Imported
Taxonomic identifieri10678 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesMyoviridaePunalikevirus
Virus hostiEnterobacteriaceae [TaxID: 543]
ProteomesiUP000001577: Genome, UP000008091: Genome

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1ZX4X-ray2.98A/B142-333[»]
2NTZX-ray3.35A/B142-333[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ38420.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni209 – 2113Citrate 1 bindingImported
Regioni218 – 2192Citrate 2 bindingImported

Family and domain databases

InterProiIPR004437. ParB/RepB/Spo0J.
IPR003115. ParB/Sulfiredoxin_dom.
IPR014884. ParB_fam_C.
[Graphical view]
PfamiPF08775. ParB. 1 hit.
PF02195. ParBc. 1 hit.
[Graphical view]
SMARTiSM00470. ParB. 1 hit.
[Graphical view]
SUPFAMiSSF110849. SSF110849. 1 hit.
TIGRFAMsiTIGR00180. parB_part. 1 hit.

Sequencei

Sequence statusi: Complete.

Q38420-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSKKNRPTIG RTLNPSILSG FDSSSASGDR VEQVFKLSTG RQATFIEEVI
60 70 80 90 100
PPNQVESDTF VDQHNNGRDQ ASLTPKSLKS IRSTIKHQQF YPAIGVRRAT
110 120 130 140 150
GKIEILDGSR RRASAILENV GLRVLVTDQE ISVQEAQNLA KDVQTALQHS
160 170 180 190 200
IREIGLRLMR MKNDGMSQKD IAAKEGLSQA KVTRALQAAS APEELVALFP
210 220 230 240 250
VQSELTFSDY KTLCAVGDEM GNKNLEFDQL IQNISPEIND ILSIEEMAED
260 270 280 290 300
EVKNKILRLI TKEASLLTDK GSKDKSVVTE LWKFEDKDRF ARKRVKGRAF
310 320 330
SYEFNRLSKE LQEELDRMIG HILRKSLDKK PKP
Length:333
Mass (Da):37,441
Last modified:November 1, 1996 - v1
Checksum:iBC8C1B240B9BCB83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02380 Genomic DNA. Translation: AAA99231.1.
AF234172 Genomic DNA. Translation: AAQ14031.1.
AF234173 Genomic DNA. Translation: AAQ14139.1.
PIRiB23752. BVECPB.
RefSeqiYP_006527.1. NC_005856.1.

Genome annotation databases

GeneIDi2777493.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K02380 Genomic DNA. Translation: AAA99231.1 .
AF234172 Genomic DNA. Translation: AAQ14031.1 .
AF234173 Genomic DNA. Translation: AAQ14139.1 .
PIRi B23752. BVECPB.
RefSeqi YP_006527.1. NC_005856.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1ZX4 X-ray 2.98 A/B 142-333 [» ]
2NTZ X-ray 3.35 A/B 142-333 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 2777493.

Miscellaneous databases

EvolutionaryTracei Q38420.

Family and domain databases

InterProi IPR004437. ParB/RepB/Spo0J.
IPR003115. ParB/Sulfiredoxin_dom.
IPR014884. ParB_fam_C.
[Graphical view ]
Pfami PF08775. ParB. 1 hit.
PF02195. ParBc. 1 hit.
[Graphical view ]
SMARTi SM00470. ParB. 1 hit.
[Graphical view ]
SUPFAMi SSF110849. SSF110849. 1 hit.
TIGRFAMsi TIGR00180. parB_part. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
  2. "Partition of unit-copy miniplasmids to daughter cells. III. The DNA sequence and functional organization of the P1 partition region."
    Abeles A.L., Friedman S.A., Austin S.J.
    J. Mol. Biol. 185:261-272(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  3. "P1 plasmid replication: multiple functions of RepA protein at the origin."
    Chattoraj D.K., Snyder K.M., Abeles A.L.
    Proc. Natl. Acad. Sci. U.S.A. 82:2588-2592(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "P1 plasmid replication requires Escherichia coli Dam-methylated DNA."
    Abeles A.L., Austin S.J.
    Gene 74:185-186(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  5. "Fine-structure analysis of the P1 plasmid partition site."
    Martin K.A., Davis M.A., Austin S.
    J. Bacteriol. 173:3630-3634(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  6. Lobocka M.B.
    Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Mod1902::IS5 c1.100 rev dmtImported.
  7. E. coli Genome Project
    Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Mod1902::IS5 c1.100 rev dmtImported.
  8. Rusin M., Samojedny A.
    Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Mod749::IS5 c1.100 mutantImported.
  9. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Mod1902::IS5 c1.100 rev dmtImported and Mod749::IS5 c1.100 mutantImported.
  10. "Structures of ParB bound to DNA reveal mechanism of partition complex formation."
    Schumacher M.A., Funnell B.E.
    Nature 438:516-519(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.98 ANGSTROMS) OF 142-333.
  11. "Structure of a four-way bridged ParB-DNA complex provides insight into P1 segrosome assembly."
    Schumacher M.A., Mansoor A., Funnell B.E.
    J. Biol. Chem. 282:10456-10464(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.35 ANGSTROMS) OF 142-333.

Entry informationi

Entry nameiQ38420_BPP1
AccessioniPrimary (citable) accession number: Q38420
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 26, 2014
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3