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Protein

40S ribosomal protein SA

Gene

Tb11.01.2680

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein SAUniRule annotation
Gene namesi
ORF Names:Tb11.01.2680Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
Proteomesi
  • UP000008524 Componenti: Chromosome 11 Scaffold 1

Organism-specific databases

EuPathDBiTriTrypDB:Tb927.11.10910.

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with ribosomal protein S21.UniRule annotation

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V8Melectron microscopy5.57AC1-277[»]
ProteinModelPortaliQ383I8.
SMRiQ383I8. Positions 45-241.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S2P family.UniRule annotationSAAS annotation

Phylogenomic databases

HOGENOMiHOG000232073.
InParanoidiQ383I8.
KOiK02998.

Family and domain databases

CDDicd01425. RPS2. 1 hit.
HAMAPiMF_03015. Ribosomal_S2_euk. 1 hit.
InterProiIPR001865. Ribosomal_S2.
IPR018130. Ribosomal_S2_CS.
IPR027498. Ribosomal_S2_euk.
IPR005707. Ribosomal_S2_euk/arc.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERiPTHR11489. PTHR11489. 1 hit.
PfamiPF00318. Ribosomal_S2. 2 hits.
[Graphical view]
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01012. uS2_euk_arch. 1 hit.
PROSITEiPS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q383I8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTETSRRDLI FLVLSPFSPS LSSKALRNSH TRNMTSVSSG AKVLRMKESD
60 70 80 90 100
VQKLLAMHCH LGTKNSSSAM KKYIHGRTSD GTNIIDIHMT WEKLILAARV
110 120 130 140 150
IAAVENPQDV TVCSTRLFGQ RAIFKFSQLV GTSFLGGRFI PGTFTNQIQK
160 170 180 190 200
KFMQPRVLVV TDPRTDHQAL REASLVNIPV IAFCDTDAPL EFVDIAIPCN
210 220 230 240 250
NRGRHSISMM YWLLAREVLR LRGTIPRSVP WEVKVDLFFY RDPEEALKQE
260 270
EATAAAEVHE EADEGYGWVE RDNTWEQ
Length:277
Mass (Da):31,354
Last modified:November 22, 2005 - v1
Checksum:iB746058506B77D3B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH464491 Genomic DNA. Translation: EAN80043.1.
RefSeqiXP_829155.1. XM_824062.1.

Genome annotation databases

EnsemblProtistsiEAN80043; EAN80043; Tb11.01.2680.
GeneDBiTb927.11.10910:pep.
GeneIDi3665659.
KEGGitbr:Tb11.01.2680.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH464491 Genomic DNA. Translation: EAN80043.1.
RefSeqiXP_829155.1. XM_824062.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4V8Melectron microscopy5.57AC1-277[»]
ProteinModelPortaliQ383I8.
SMRiQ383I8. Positions 45-241.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiEAN80043; EAN80043; Tb11.01.2680.
GeneDBiTb927.11.10910:pep.
GeneIDi3665659.
KEGGitbr:Tb11.01.2680.

Organism-specific databases

EuPathDBiTriTrypDB:Tb927.11.10910.

Phylogenomic databases

HOGENOMiHOG000232073.
InParanoidiQ383I8.
KOiK02998.

Family and domain databases

CDDicd01425. RPS2. 1 hit.
HAMAPiMF_03015. Ribosomal_S2_euk. 1 hit.
InterProiIPR001865. Ribosomal_S2.
IPR018130. Ribosomal_S2_CS.
IPR027498. Ribosomal_S2_euk.
IPR005707. Ribosomal_S2_euk/arc.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERiPTHR11489. PTHR11489. 1 hit.
PfamiPF00318. Ribosomal_S2. 2 hits.
[Graphical view]
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01012. uS2_euk_arch. 1 hit.
PROSITEiPS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ383I8_TRYB2
AccessioniPrimary (citable) accession number: Q383I8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: September 7, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.