Q383I8 (Q383I8_TRYB2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
40S ribosomal protein SA, putative EMBL EAN80043.1

Gene names

ORF Names:

Tb11.01.2680 EMBL EAN80043.1

Organism

Trypanosoma brucei brucei (strain 927/4 GUTat10.1) [Reference proteome]

Taxonomic identifier

999953 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Euglenozoa › Kinetoplastida › Trypanosomatidae › Trypanosoma › Trypanozoon › Trypanosoma brucei › Trypanosoma brucei brucei

Protein attributes

Sequence length	277 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits By similarity. SAAS SAAS005707
Sequence similarities	Belongs to the ribosomal protein S2P family. RuleBase RU003631

Ontologies

Keywords
Cellular component	Cytoplasm SAAS SAAS005707
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU003631 EMBL EAN80043.1
Technical term	3D-structure PDB 3ZEY Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q383I8 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: B746058506B77D3B	FASTA	277	31,354
	10 20 30 40 50 60 MTETSRRDLI FLVLSPFSPS LSSKALRNSH TRNMTSVSSG AKVLRMKESD VQKLLAMHCH 70 80 90 100 110 120 LGTKNSSSAM KKYIHGRTSD GTNIIDIHMT WEKLILAARV IAAVENPQDV TVCSTRLFGQ 130 140 150 160 170 180 RAIFKFSQLV GTSFLGGRFI PGTFTNQIQK KFMQPRVLVV TDPRTDHQAL REASLVNIPV 190 200 210 220 230 240 IAFCDTDAPL EFVDIAIPCN NRGRHSISMM YWLLAREVLR LRGTIPRSVP WEVKVDLFFY 250 260 270 RDPEEALKQE EATAAAEVHE EADEGYGWVE RDNTWEQ

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of the African trypanosome Trypanosoma brucei." Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M. , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A. Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 927/4 GUTat10.1 EMBL EAN80043.1.
[2]	"High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome." Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J. Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CH464491 Genomic DNA. Translation: EAN80043.1.

RefSeq

XP_829155.1. XM_824062.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3ZEY	electron microscopy	5.57	C	1-277	[»]

ProteinModelPortal

Q383I8.

SMR

Q383I8. Positions 45-241.

ModBase

Search...

Protein-protein interaction databases

STRING

5691.Tb11.01.2680.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblProtists

EAN80043; EAN80043; Tb11.01.2680.

GeneID

3665659.

KEGG

tbr:Tb11.01.2680.

Phylogenomic databases

eggNOG

COG0052.

HOGENOM

HOG000232073.

KO

K02998.

ProtClustDB

PTZ00254.

Family and domain databases

InterPro

IPR001865. Ribosomal_S2.
IPR018130. Ribosomal_S2_CS.
IPR005707. Ribosomal_S2_euk/arc.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]

PANTHER

PTHR11489. PTHR11489. 1 hit.

Pfam

PF00318. Ribosomal_S2. 2 hits.
[Graphical view]

PRINTS

PR00395. RIBOSOMALS2.

SUPFAM

SSF52313. Ribosomal_S2. 1 hit.

TIGRFAMs

TIGR01012. Sa_S2_E_A. 1 hit.

PROSITE

PS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q383I8_TRYB2

Accession

Primary (citable) accession number: Q383I8

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)