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Q382Z8

- Q382Z8_TRYB2

UniProt

Q382Z8 - Q382Z8_TRYB2

Protein
Submitted name:

40S ribosomal protein S17, putative

Gene

Tb11.01.3675

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein S17, putativeImported
    Gene namesi
    ORF Names:Tb11.01.3675Imported, Tb11.01.3676Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 11 Scaffold 1

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb11.01.3676.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZEYelectron microscopy5.57L1-142[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1383.
    HOGENOMiHOG000227166.
    KOiK02962.

    Family and domain databases

    Gene3Di1.10.60.20. 1 hit.
    HAMAPiMF_00511. Ribosomal_S17e.
    InterProiIPR001210. Ribosomal_S17e.
    [Graphical view]
    PANTHERiPTHR10732. PTHR10732. 1 hit.
    PfamiPF00833. Ribosomal_S17e. 1 hit.
    [Graphical view]
    SUPFAMiSSF116820. SSF116820. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q382Z8-1 [UniParc]FASTAAdd to Basket

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    MGKIRTKTVK RASKQIVEKY FSKLNKDFYQ NKRIVMDVTI ARSKKLKNKI    50
    AGYATHIMKR LARGPVRGIS LKLQEEERER RMDYVPEVSH VDQAIQDGIR 100
    VDKQTLAMLK RMETGVPRHV LPNVVAAPNV SKGARRGGPA RK 142
    Length:142
    Mass (Da):16,222
    Last modified:November 22, 2005 - v1
    Checksum:iE351EBDF28750315
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH464491 Genomic DNA. Translation: EAN80132.1.
    CH464491 Genomic DNA. Translation: EAN80133.1.
    RefSeqiXP_829244.1. XM_824151.1.
    XP_829245.1. XM_824152.1.

    Genome annotation databases

    EnsemblProtistsiEAN80132; EAN80132; Tb11.01.3675.
    EAN80133; EAN80133; Tb11.01.3676.
    GeneIDi3665726.
    3665727.
    KEGGitbr:Tb11.01.3675.
    tbr:Tb11.01.3676.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH464491 Genomic DNA. Translation: EAN80132.1 .
    CH464491 Genomic DNA. Translation: EAN80133.1 .
    RefSeqi XP_829244.1. XM_824151.1.
    XP_829245.1. XM_824152.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZEY electron microscopy 5.57 L 1-142 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb11.01.3676.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAN80132 ; EAN80132 ; Tb11.01.3675 .
    EAN80133 ; EAN80133 ; Tb11.01.3676 .
    GeneIDi 3665726.
    3665727.
    KEGGi tbr:Tb11.01.3675.
    tbr:Tb11.01.3676.

    Phylogenomic databases

    eggNOGi COG1383.
    HOGENOMi HOG000227166.
    KOi K02962.

    Family and domain databases

    Gene3Di 1.10.60.20. 1 hit.
    HAMAPi MF_00511. Ribosomal_S17e.
    InterProi IPR001210. Ribosomal_S17e.
    [Graphical view ]
    PANTHERi PTHR10732. PTHR10732. 1 hit.
    Pfami PF00833. Ribosomal_S17e. 1 hit.
    [Graphical view ]
    SUPFAMi SSF116820. SSF116820. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ382Z8_TRYB2
    AccessioniPrimary (citable) accession number: Q382Z8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3