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Protein

60S ribosomal protein L18a

Gene

Tb10.70.3510

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L18aUniRule annotation
Gene namesi
ORF Names:Tb10.70.3510Imported, Tb11.01.5720Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
Proteomesi
  • UP000008524 Componentsi: Chromosome 10, Chromosome 11 Scaffold 1

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi5691.EAN80357.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V8Melectron microscopy5.57BS1-179[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 129Ribosomal_L18AInterPro annotationAdd BLAST124

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL20 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000211377.
KOiK02882.
OMAiCRRPAIK.

Family and domain databases

HAMAPiMF_00273. Ribosomal_L18Ae. 1 hit.
InterProiView protein in InterPro
IPR028877. 50S_L18Ae/Ribosomal_L18a/L20.
IPR023573. Ribosomal_L18a//L18Ae/LX.
IPR021138. Ribosomal_L18a/L20_eukaryotes.
PfamiView protein in Pfam
PF01775. Ribosomal_L18A. 1 hit.
PIRSFiPIRSF002190. Ribosomal_L18a. 1 hit.

Sequencei

Sequence statusi: Complete.

Q382C4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRPHLRHYC VVGRETPSEK NPQPTVYKFE VFAPNFVVAK SRFWRMMREK
60 70 80 90 100
NKVKSTHGDV LSCKVVKDRK LAARNYSVDI AYYSQRCGYT HMVKEFRDVC
110 120 130 140 150
KAGAVSQAYN DLASRHRARY HNIEVLGVKS IPNHEVRRLN VAQFHPHNLS
160 170
FPLLQRRVKA PRKDRVIFVK KNSKRAVVA
Length:179
Mass (Da):20,904
Last modified:November 22, 2005 - v1
Checksum:i57D900A212BE50D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000208 Genomic DNA. Translation: EAN77804.1.
CH464491 Genomic DNA. Translation: EAN80357.1.
RefSeqiXP_822632.1. XM_817539.1.
XP_829469.1. XM_824376.1.

Genome annotation databases

EnsemblProtistsiEPrT00001295704; EPrP00001312605; EPrG00001285719.
EPrT00001299231; EPrP00001314340; EPrG00001287510.
GeneDBiTb927.10.3840:pep.
Tb927.11.14130:pep.
GeneIDi3662334.
3665177.
KEGGitbr:Tb10.70.3510.
tbr:Tb11.01.5720.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ382C4_TRYB2
AccessioniPrimary (citable) accession number: Q382C4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: July 5, 2017
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported