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Q382C4

- Q382C4_TRYB2

UniProt

Q382C4 - Q382C4_TRYB2

Protein

60S ribosomal protein L18a

Gene

Tb10.70.3510

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L18aUniRule annotation
    Gene namesi
    ORF Names:Tb10.70.3510Imported, Tb11.01.5720Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 10, UP000008524: Chromosome 11 Scaffold 1

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb11.01.5720.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57S1-179[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L18Ae family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2157.
    HOGENOMiHOG000211377.
    KOiK02882.
    OMAiCRRPAIK.

    Family and domain databases

    HAMAPiMF_00273. Ribosomal_L18Ae.
    InterProiIPR028877. 50S_L18Ae/Ribosomal_L18a/L20.
    IPR021138. Ribosomal_L18a/L20_eukaryotes.
    IPR023573. Ribosomal_L18a/LX.
    [Graphical view]
    PfamiPF01775. Ribosomal_L18ae. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002190. Ribosomal_L18a. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q382C4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVRPHLRHYC VVGRETPSEK NPQPTVYKFE VFAPNFVVAK SRFWRMMREK    50
    NKVKSTHGDV LSCKVVKDRK LAARNYSVDI AYYSQRCGYT HMVKEFRDVC 100
    KAGAVSQAYN DLASRHRARY HNIEVLGVKS IPNHEVRRLN VAQFHPHNLS 150
    FPLLQRRVKA PRKDRVIFVK KNSKRAVVA 179
    Length:179
    Mass (Da):20,904
    Last modified:November 22, 2005 - v1
    Checksum:i57D900A212BE50D0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000208 Genomic DNA. Translation: EAN77804.1.
    CH464491 Genomic DNA. Translation: EAN80357.1.
    RefSeqiXP_822632.1. XM_817539.1.
    XP_829469.1. XM_824376.1.

    Genome annotation databases

    EnsemblProtistsiEAN77804; EAN77804; Tb10.70.3510.
    EAN80357; EAN80357; Tb11.01.5720.
    GeneIDi3662334.
    3665177.
    KEGGitbr:Tb10.70.3510.
    tbr:Tb11.01.5720.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000208 Genomic DNA. Translation: EAN77804.1 .
    CH464491 Genomic DNA. Translation: EAN80357.1 .
    RefSeqi XP_822632.1. XM_817539.1.
    XP_829469.1. XM_824376.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 S 1-179 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb11.01.5720.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAN77804 ; EAN77804 ; Tb10.70.3510 .
    EAN80357 ; EAN80357 ; Tb11.01.5720 .
    GeneIDi 3662334.
    3665177.
    KEGGi tbr:Tb10.70.3510.
    tbr:Tb11.01.5720.

    Phylogenomic databases

    eggNOGi COG2157.
    HOGENOMi HOG000211377.
    KOi K02882.
    OMAi CRRPAIK.

    Family and domain databases

    HAMAPi MF_00273. Ribosomal_L18Ae.
    InterProi IPR028877. 50S_L18Ae/Ribosomal_L18a/L20.
    IPR021138. Ribosomal_L18a/L20_eukaryotes.
    IPR023573. Ribosomal_L18a/LX.
    [Graphical view ]
    Pfami PF01775. Ribosomal_L18ae. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002190. Ribosomal_L18a. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ382C4_TRYB2
    AccessioniPrimary (citable) accession number: Q382C4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3