Q382C4 (Q382C4_TRYB2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
60S ribosomal protein L18a PIRNR PIRNR002190

Gene names

ORF Names:

Tb10.70.3510 EMBL EAN77804.1, Tb11.01.5720 EMBL EAN80357.1

Organism

Trypanosoma brucei brucei (strain 927/4 GUTat10.1) [Reference proteome]

Taxonomic identifier

999953 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Euglenozoa › Kinetoplastida › Trypanosomatidae › Trypanosoma › Trypanozoon › Trypanosoma brucei › Trypanosoma brucei brucei

Protein attributes

Sequence length	179 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L18Ae family. PIRNR PIRNR002190

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein PIRNR PIRNR002190 EMBL EAN80357.1
Technical term	3D-structure PDB 3ZF7 Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q382C4 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: 57D900A212BE50D0	FASTA	179	20,904
	10 20 30 40 50 60 MVRPHLRHYC VVGRETPSEK NPQPTVYKFE VFAPNFVVAK SRFWRMMREK NKVKSTHGDV 70 80 90 100 110 120 LSCKVVKDRK LAARNYSVDI AYYSQRCGYT HMVKEFRDVC KAGAVSQAYN DLASRHRARY 130 140 150 160 170 HNIEVLGVKS IPNHEVRRLN VAQFHPHNLS FPLLQRRVKA PRKDRVIFVK KNSKRAVVA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Comparative genomics of trypanosomatid parasitic protozoa." El-Sayed N.M.A., Myler P.J., Blandin G., Berriman M., Crabtree J., Aggarwal G., Caler E., Renauld H., Worthey E.A., Hertz-Fowler C., Ghedin E., Peacock C., Bartholomeu D.C., Haas B.J., Tran A.-N., Wortman J.R., Alsmark U.C.M., Angiuoli S. , Anupama A., Badger J., Bringaud F., Cadag E., Carlton J.M., Cerqueira G.C., Creasy T., Delcher A.L., Djikeng A., Embley T.M., Hauser C., Ivens A.C., Kummerfeld S.K., Pereira-Leal J.B., Nilsson D., Peterson J., Salzberg S.L., Shallom J., Silva J.C., Sundaram J., Westenberger S., White O., Melville S.E., Donelson J.E., Andersson B., Stuart K.D., Hall N. Science 309:404-409(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 927/4 GUTat10.1 EMBL EAN80357.1.
[2]	"The genome of the African trypanosome Trypanosoma brucei." Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M. , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A. Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 927/4 GUTat10.1 EMBL EAN80357.1.
[3]	"High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome." Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J. Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CM000208 Genomic DNA. Translation: EAN77804.1.
CH464491 Genomic DNA. Translation: EAN80357.1.

RefSeq

XP_822632.1. XM_817539.1.
XP_829469.1. XM_824376.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3ZF7	electron microscopy	5.57	S	1-179	[»]

ModBase

Search...

Protein-protein interaction databases

STRING

5691.Tb11.01.5720.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblProtists

EAN77804; EAN77804; Tb10.70.3510.
EAN80357; EAN80357; Tb11.01.5720.

GeneID

3662334.
3665177.

KEGG

tbr:Tb10.70.3510.
tbr:Tb11.01.5720.

Phylogenomic databases

eggNOG

COG2157.

HOGENOM

HOG000211377.

KO

K02882.

OMA

KSRYWYF.

ProtClustDB

CLSZ2447207.

Family and domain databases

InterPro

IPR021138. Ribosomal_L18a.
IPR023573. Ribosomal_L18a/LX.
[Graphical view]

PANTHER

PTHR10052. PTHR10052. 1 hit.

Pfam

PF01775. Ribosomal_L18ae. 1 hit.
[Graphical view]

PIRSF

PIRSF002190. Ribosomal_L18a. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q382C4_TRYB2

Accession

Primary (citable) accession number: Q382C4

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)