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Q382C4

- Q382C4_TRYB2

UniProt

Q382C4 - Q382C4_TRYB2

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Protein

60S ribosomal protein L18a

Gene

Tb10.70.3510

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L18aUniRule annotation
Gene namesi
ORF Names:Tb10.70.3510Imported, Tb11.01.5720Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 10, UP000008524: Chromosome 11 Scaffold 1

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5691.Tb11.01.5720.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57S1-179[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L18Ae family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2157.
HOGENOMiHOG000211377.
KOiK02882.
OMAiCRRPAIK.

Family and domain databases

HAMAPiMF_00273. Ribosomal_L18Ae.
InterProiIPR028877. 50S_L18Ae/Ribosomal_L18a/L20.
IPR021138. Ribosomal_L18a/L20_eukaryotes.
IPR023573. Ribosomal_L18a/LX.
[Graphical view]
PfamiPF01775. Ribosomal_L18ae. 1 hit.
[Graphical view]
PIRSFiPIRSF002190. Ribosomal_L18a. 1 hit.

Sequencei

Sequence statusi: Complete.

Q382C4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVRPHLRHYC VVGRETPSEK NPQPTVYKFE VFAPNFVVAK SRFWRMMREK
60 70 80 90 100
NKVKSTHGDV LSCKVVKDRK LAARNYSVDI AYYSQRCGYT HMVKEFRDVC
110 120 130 140 150
KAGAVSQAYN DLASRHRARY HNIEVLGVKS IPNHEVRRLN VAQFHPHNLS
160 170
FPLLQRRVKA PRKDRVIFVK KNSKRAVVA
Length:179
Mass (Da):20,904
Last modified:November 22, 2005 - v1
Checksum:i57D900A212BE50D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000208 Genomic DNA. Translation: EAN77804.1.
CH464491 Genomic DNA. Translation: EAN80357.1.
RefSeqiXP_822632.1. XM_817539.1.
XP_829469.1. XM_824376.1.

Genome annotation databases

GeneIDi3662334.
3665177.
KEGGitbr:Tb10.70.3510.
tbr:Tb11.01.5720.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000208 Genomic DNA. Translation: EAN77804.1 .
CH464491 Genomic DNA. Translation: EAN80357.1 .
RefSeqi XP_822632.1. XM_817539.1.
XP_829469.1. XM_824376.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZF7 electron microscopy 5.57 S 1-179 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5691.Tb11.01.5720.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 3662334.
3665177.
KEGGi tbr:Tb10.70.3510.
tbr:Tb11.01.5720.

Phylogenomic databases

eggNOGi COG2157.
HOGENOMi HOG000211377.
KOi K02882.
OMAi CRRPAIK.

Family and domain databases

HAMAPi MF_00273. Ribosomal_L18Ae.
InterProi IPR028877. 50S_L18Ae/Ribosomal_L18a/L20.
IPR021138. Ribosomal_L18a/L20_eukaryotes.
IPR023573. Ribosomal_L18a/LX.
[Graphical view ]
Pfami PF01775. Ribosomal_L18ae. 1 hit.
[Graphical view ]
PIRSFi PIRSF002190. Ribosomal_L18a. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  2. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  3. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ382C4_TRYB2
AccessioniPrimary (citable) accession number: Q382C4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: October 29, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3