Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q38135 (ALYS_BPR1T) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
N-acetylmuramoyl-L-alanine amidase

EC=3.5.1.28
OrganismLactococcus phage r1t (Bacteriophage r1t) [Complete proteome]
Taxonomic identifier43685 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageCaudoviralesSiphoviridae
Virus hostLactococcus lactis subsp. cremoris (Streptococcus cremoris) [TaxID: 1359]

Protein attributes

Sequence length270 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides.

Subcellular location

Secreted Potential.

Sequence similarities

Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.

Ontologies

Keywords
   Biological processCell wall biogenesis/degradation
   Cellular componentSecreted
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionN-acetylmuramoyl-L-alanine amidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 270270N-acetylmuramoyl-L-alanine amidase
PRO_0000164407

Sequences

Sequence LengthMass (Da)Tools
Q38135 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 80A5E38F7F2A6675

FASTA27030,214
        10         20         30         40         50         60 
MTIYDKTFLL GTGQGSSQKA SNRYIVIHDT ANDNNQGDNS ATNEASYMHN NWQNAYTHAI 

        70         80         90        100        110        120 
AGWDKVYLVG EPGYVAYGAG SPANERSPFQ IELSHYSDPA KQRSSYINYI NAVREQAKVF 

       130        140        150        160        170        180 
GIPLTLDGAG NGIKTHKWVS DNLWGDHQDP YSYLTRIGIS KDQLAKDLAN GIGGASKSNQ 

       190        200        210        220        230        240 
SNNDDSTHAI NYTPNMEEKE MTYLIFAKDT KRWYITNGIE IRYIKTGRVL GNYQNQWLKF 

       250        260        270 
KLPVDTMFQA EVDKEFGTGA TNPNRDISKG 

« Hide

References

[1]"Sequence analysis and molecular characterization of the temperate lactococcal bacteriophage r1t."
van Sinderen D., Karsens H., Kok J., Terpstra P., Ruiters M.H., Venema G., Nauta A.
Mol. Microbiol. 19:1343-1355(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U38906 Genomic DNA. Translation: AAB18724.1.
RefSeqNP_695077.1. NC_004302.1.

3D structure databases

ProteinModelPortalQ38135.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID955499.

Family and domain databases

Gene3D3.40.80.10. 1 hit.
InterProIPR002502. Amidase_domain.
[Graphical view]
PfamPF01510. Amidase_2. 1 hit.
[Graphical view]
SMARTSM00644. Ami_2. 1 hit.
[Graphical view]
SUPFAMSSF55846. SSF55846. 1 hit.
ProtoNetSearch...

Entry information

Entry nameALYS_BPR1T
AccessionPrimary (citable) accession number: Q38135
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: October 16, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families