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Protein

N-acetylmuramoyl-L-alanine amidase

Gene
N/A
Organism
Lactococcus phage r1t (Bacteriophage r1t)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides.

GO - Molecular functioni

  1. N-acetylmuramoyl-L-alanine amidase activity Source: UniProtKB-EC

GO - Biological processi

  1. cell wall organization Source: UniProtKB-KW
  2. peptidoglycan catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Cell wall biogenesis/degradation

Names & Taxonomyi

Protein namesi
Recommended name:
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
OrganismiLactococcus phage r1t (Bacteriophage r1t)
Taxonomic identifieri43685 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesSiphoviridae
Virus hostiLactococcus lactis subsp. cremoris (Streptococcus cremoris) [TaxID: 1359]
ProteomesiUP000001164 Componenti: Genome

Subcellular locationi

Secreted Curated

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 270270N-acetylmuramoyl-L-alanine amidasePRO_0000164407Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ38135.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Family and domain databases

Gene3Di3.40.80.10. 1 hit.
InterProiIPR002502. Amidase_domain.
[Graphical view]
PfamiPF01510. Amidase_2. 1 hit.
[Graphical view]
SMARTiSM00644. Ami_2. 1 hit.
[Graphical view]
SUPFAMiSSF55846. SSF55846. 1 hit.

Sequencei

Sequence statusi: Complete.

Q38135-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIYDKTFLL GTGQGSSQKA SNRYIVIHDT ANDNNQGDNS ATNEASYMHN
60 70 80 90 100
NWQNAYTHAI AGWDKVYLVG EPGYVAYGAG SPANERSPFQ IELSHYSDPA
110 120 130 140 150
KQRSSYINYI NAVREQAKVF GIPLTLDGAG NGIKTHKWVS DNLWGDHQDP
160 170 180 190 200
YSYLTRIGIS KDQLAKDLAN GIGGASKSNQ SNNDDSTHAI NYTPNMEEKE
210 220 230 240 250
MTYLIFAKDT KRWYITNGIE IRYIKTGRVL GNYQNQWLKF KLPVDTMFQA
260 270
EVDKEFGTGA TNPNRDISKG
Length:270
Mass (Da):30,214
Last modified:October 31, 1996 - v1
Checksum:i80A5E38F7F2A6675
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U38906 Genomic DNA. Translation: AAB18724.1.
RefSeqiNP_695077.1. NC_004302.1.

Genome annotation databases

GeneIDi955499.
KEGGivg:955499.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U38906 Genomic DNA. Translation: AAB18724.1.
RefSeqiNP_695077.1. NC_004302.1.

3D structure databases

ProteinModelPortaliQ38135.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi955499.
KEGGivg:955499.

Family and domain databases

Gene3Di3.40.80.10. 1 hit.
InterProiIPR002502. Amidase_domain.
[Graphical view]
PfamiPF01510. Amidase_2. 1 hit.
[Graphical view]
SMARTiSM00644. Ami_2. 1 hit.
[Graphical view]
SUPFAMiSSF55846. SSF55846. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis and molecular characterization of the temperate lactococcal bacteriophage r1t."
    van Sinderen D., Karsens H., Kok J., Terpstra P., Ruiters M.H., Venema G., Nauta A.
    Mol. Microbiol. 19:1343-1355(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiALYS_BPR1T
AccessioniPrimary (citable) accession number: Q38135
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 1997
Last sequence update: October 31, 1996
Last modified: March 31, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.