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Q38087

- DPOL_BPR69

UniProt

Q38087 - DPOL_BPR69

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Protein

DNA polymerase

Gene

43

Organism
Enterobacteria phage RB69 (Bacteriophage RB69)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction.

Catalytic activityi

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. DNA-directed DNA polymerase activity Source: UniProtKB-KW
  3. exonuclease activity Source: UniProtKB-KW
  4. nucleotide binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DNA-directed DNA polymerase, Exonuclease, Hydrolase, Nuclease, Nucleotidyltransferase, Transferase

Keywords - Biological processi

DNA replication

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

SABIO-RKQ38087.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA polymerase (EC:2.7.7.7)
Alternative name(s):
Gp43
Gene namesi
Name:43
OrganismiEnterobacteria phage RB69 (Bacteriophage RB69)
Taxonomic identifieri12353 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesMyoviridaeTevenvirinaeT4likevirus
Virus hostiEscherichia coli [TaxID: 562]
ProteomesiUP000000876: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 903903DNA polymerasePRO_0000046547Add
BLAST

Structurei

Secondary structure

1
903
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi4 – 118Combined sources
Beta strandi14 – 207Combined sources
Beta strandi22 – 243Combined sources
Beta strandi26 – 316Combined sources
Beta strandi36 – 405Combined sources
Beta strandi43 – 453Combined sources
Beta strandi48 – 514Combined sources
Beta strandi56 – 616Combined sources
Helixi65 – 7814Combined sources
Beta strandi82 – 843Combined sources
Helixi88 – 969Combined sources
Helixi105 – 1073Combined sources
Beta strandi110 – 1167Combined sources
Beta strandi120 – 1234Combined sources
Turni126 – 1283Combined sources
Beta strandi135 – 1406Combined sources
Turni141 – 1444Combined sources
Beta strandi145 – 1517Combined sources
Beta strandi152 – 1565Combined sources
Helixi164 – 1685Combined sources
Helixi171 – 1733Combined sources
Turni176 – 1794Combined sources
Helixi180 – 1834Combined sources
Beta strandi186 – 1938Combined sources
Helixi194 – 20714Combined sources
Beta strandi211 – 2144Combined sources
Turni218 – 2214Combined sources
Helixi222 – 23413Combined sources
Helixi236 – 2394Combined sources
Helixi240 – 2423Combined sources
Beta strandi248 – 2558Combined sources
Beta strandi258 – 2658Combined sources
Beta strandi269 – 2724Combined sources
Helixi273 – 2808Combined sources
Helixi290 – 2989Combined sources
Helixi309 – 3113Combined sources
Helixi312 – 33827Combined sources
Helixi340 – 35112Combined sources
Helixi355 – 3595Combined sources
Helixi361 – 37414Combined sources
Turni375 – 3773Combined sources
Beta strandi402 – 4043Combined sources
Beta strandi405 – 4128Combined sources
Helixi415 – 4239Combined sources
Helixi427 – 4293Combined sources
Beta strandi430 – 4334Combined sources
Helixi439 – 4435Combined sources
Beta strandi452 – 4565Combined sources
Beta strandi460 – 4634Combined sources
Beta strandi465 – 4673Combined sources
Helixi470 – 50233Combined sources
Beta strandi503 – 5053Combined sources
Beta strandi507 – 5093Combined sources
Beta strandi518 – 5203Combined sources
Helixi524 – 5307Combined sources
Beta strandi531 – 5333Combined sources
Helixi535 – 56935Combined sources
Helixi580 – 60930Combined sources
Beta strandi617 – 6215Combined sources
Beta strandi624 – 6285Combined sources
Helixi630 – 6367Combined sources
Helixi638 – 6403Combined sources
Helixi644 – 65714Combined sources
Helixi659 – 67315Combined sources
Beta strandi683 – 6897Combined sources
Beta strandi693 – 6953Combined sources
Beta strandi700 – 7045Combined sources
Beta strandi707 – 7159Combined sources
Beta strandi718 – 73013Combined sources
Helixi731 – 7333Combined sources
Helixi739 – 75416Combined sources
Helixi757 – 77014Combined sources
Helixi771 – 7733Combined sources
Helixi776 – 7794Combined sources
Beta strandi781 – 7844Combined sources
Helixi789 – 7913Combined sources
Beta strandi792 – 7976Combined sources
Helixi803 – 81412Combined sources
Turni815 – 8173Combined sources
Beta strandi819 – 8213Combined sources
Beta strandi828 – 8358Combined sources
Beta strandi837 – 8393Combined sources
Beta strandi842 – 8498Combined sources
Helixi856 – 86510Combined sources
Helixi868 – 8758Combined sources
Helixi877 – 88711Combined sources
Beta strandi891 – 8944Combined sources
Helixi897 – 9004Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1B1Fmodel-R387-892[»]
1B8HX-ray3.00D893-903[»]
1CLQX-ray2.70A1-903[»]
1IG9X-ray2.60A1-903[»]
1IH7X-ray2.21A1-903[»]
1Q9XX-ray2.69A/B/C/D1-903[»]
1Q9YX-ray2.80A1-903[»]
1QE4model-F1-903[»]
1WAFX-ray3.20A/B1-903[»]
1WAGmodel-R1-903[»]
1WAHmodel-R1-903[»]
1WAImodel-R1-903[»]
1WAJX-ray2.80A1-903[»]
2ATQX-ray3.20A1-903[»]
2DTUX-ray2.37A/B/C/D1-902[»]
2DY4X-ray2.65A/B/C/D1-903[»]
2OYQX-ray2.86A/B/C/D1-903[»]
2OZMX-ray2.86A1-903[»]
2OZSX-ray2.75A1-903[»]
2P5GX-ray2.80A/B/C/D1-903[»]
2P5OX-ray2.80A/B/C/D1-903[»]
3CFOX-ray2.60A1-903[»]
3CFPX-ray2.50A1-903[»]
3CFRX-ray2.40A1-903[»]
3CQ8X-ray2.50A1-903[»]
3KD1X-ray2.66E1-903[»]
3KD5X-ray2.69E1-903[»]
3L8BX-ray2.15A/B1-903[»]
3LDSX-ray3.00A1-903[»]
3LZIX-ray2.30A1-903[»]
3LZJX-ray2.05A1-903[»]
3NAEX-ray2.00A1-903[»]
3NCIX-ray1.79A1-903[»]
3NDKX-ray2.00A1-903[»]
3NE6X-ray2.00A1-903[»]
3NGIX-ray1.89A1-903[»]
3NHGX-ray2.50A1-903[»]
3QEIX-ray2.18A1-903[»]
3QEPX-ray1.80A1-903[»]
3QERX-ray1.96A1-903[»]
3QESX-ray1.98A1-903[»]
3QETX-ray2.08A1-903[»]
3QEVX-ray1.77A1-903[»]
3QEWX-ray1.84A1-903[»]
3QEXX-ray1.73A1-903[»]
3QNNX-ray1.92A1-901[»]
3QNOX-ray1.88A1-901[»]
3RMAX-ray2.84A/B/C/D1-903[»]
3RMBX-ray2.65A/B/C/D1-903[»]
3RMCX-ray3.00A/B/C/D1-903[»]
3RMDX-ray2.98A/B/C/D1-903[»]
3RWUX-ray2.33A1-901[»]
3S9HX-ray1.95A1-903[»]
3SCXX-ray2.35A1-901[»]
3SI6X-ray1.85A1-901[»]
3SJJX-ray2.38A1-901[»]
3SNNX-ray2.00A1-901[»]
3SPYX-ray2.14A1-901[»]
3SPZX-ray2.43A1-903[»]
3SQ0X-ray2.00A1-903[»]
3SQ1X-ray1.82A1-901[»]
3SQ2X-ray2.10A1-902[»]
3SQ4X-ray2.23A1-902[»]
3SUNX-ray2.42A1-895[»]
3SUOX-ray2.23A1-900[»]
3SUPX-ray2.32A1-903[»]
3SUQX-ray3.15A1-897[»]
3TABX-ray2.80A/B/C/D1-903[»]
3TAEX-ray2.71A/B/C/D1-903[»]
3TAFX-ray3.00A/B/C/D1-903[»]
3TAGX-ray2.95A/B/C/D1-903[»]
3UIQX-ray1.88A1-903[»]
4DTJX-ray1.90A1-901[»]
4DTMX-ray1.95A1-901[»]
4DTNX-ray1.96A1-903[»]
4DTOX-ray2.05A1-903[»]
4DTPX-ray2.05A1-903[»]
4DTRX-ray2.04A1-903[»]
4DTSX-ray1.96A1-903[»]
4DTUX-ray1.86A1-903[»]
4DTXX-ray1.84A1-903[»]
4DU1X-ray2.15A1-903[»]
4DU3X-ray2.02A1-903[»]
4DU4X-ray2.28A1-903[»]
4E3SX-ray2.04A1-903[»]
4FJ5X-ray2.05A1-903[»]
4FJ7X-ray1.90A1-903[»]
4FJ8X-ray2.19A1-903[»]
4FJ9X-ray1.97A1-903[»]
4FJGX-ray2.02A1-903[»]
4FJHX-ray2.11A1-903[»]
4FJIX-ray2.20A1-903[»]
4FJJX-ray1.99A1-903[»]
4FJKX-ray2.00A1-903[»]
4FJLX-ray1.87A1-903[»]
4FJMX-ray2.02A1-903[»]
4FJNX-ray1.98A1-903[»]
4FJXX-ray2.11A1-903[»]
4FK0X-ray2.18A1-903[»]
4FK2X-ray1.98A1-903[»]
4FK4X-ray1.90A1-903[»]
4I9LX-ray2.60A1-903[»]
4I9QX-ray2.30A/B1-903[»]
4J2AX-ray1.80A1-901[»]
4J2BX-ray2.04A1-901[»]
4J2DX-ray1.76A1-901[»]
4J2EX-ray2.02A1-901[»]
4KHNX-ray2.55A/B1-903[»]
4KHQX-ray2.19A1-903[»]
4KHSX-ray2.12A1-903[»]
4KHUX-ray2.05A1-903[»]
4KHWX-ray2.37A1-903[»]
4KHYX-ray2.25A1-903[»]
4KI4X-ray2.45A1-903[»]
4KI6X-ray2.55A1-903[»]
4M3RX-ray2.07A1-903[»]
4M3TX-ray1.90A1-903[»]
4M3UX-ray2.07A1-903[»]
4M3WX-ray2.10A1-903[»]
4M3XX-ray2.20A1-903[»]
4M3YX-ray1.86A1-903[»]
4M3ZX-ray1.84A1-903[»]
4M41X-ray2.15A1-903[»]
4M42X-ray2.04A1-903[»]
4M45X-ray1.89A1-903[»]
ProteinModelPortaliQ38087.
SMRiQ38087. Positions 1-903.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ38087.

Family & Domainsi

Sequence similaritiesi

Belongs to the DNA polymerase type-B family.Curated

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.90.1600.10. 2 hits.
InterProiIPR006172. DNA-dir_DNA_pol_B.
IPR017964. DNA-dir_DNA_pol_B_CS.
IPR006133. DNA-dir_DNA_pol_B_exonuc.
IPR006134. DNA-dir_DNA_pol_B_multi_dom.
IPR023211. DNA_pol_palm_dom.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF00136. DNA_pol_B. 1 hit.
PF03104. DNA_pol_B_exo1. 1 hit.
[Graphical view]
PRINTSiPR00106. DNAPOLB.
SMARTiSM00486. POLBc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS00116. DNA_POLYMERASE_B. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q38087-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKEFYLTVEQ IGDSIFERYI DSNGRERTRE VEYKPSLFAH CPESQATKYF
60 70 80 90 100
DIYGKPCTRK LFANMRDASQ WIKRMEDIGL EALGMDDFKL AYLSDTYNYE
110 120 130 140 150
IKYDHTKIRV ANFDIEVTSP DGFPEPSQAK HPIDAITHYD SIDDRFYVFD
160 170 180 190 200
LLNSPYGNVE EWSIEIAAKL QEQGGDEVPS EIIDKIIYMP FDNEKELLME
210 220 230 240 250
YLNFWQQKTP VILTGWNVES FDIPYVYNRI KNIFGESTAK RLSPHRKTRV
260 270 280 290 300
KVIENMYGSR EIITLFGISV LDYIDLYKKF SFTNQPSYSL DYISEFELNV
310 320 330 340 350
GKLKYDGPIS KLRESNHQRY ISYNIIDVYR VLQIDAKRQF INLSLDMGYY
360 370 380 390 400
AKIQIQSVFS PIKTWDAIIF NSLKEQNKVI PQGRSHPVQP YPGAFVKEPI
410 420 430 440 450
PNRYKYVMSF DLTSLYPSII RQVNISPETI AGTFKVAPLH DYINAVAERP
460 470 480 490 500
SDVYSCSPNG MMYYKDRDGV VPTEITKVFN QRKEHKGYML AAQRNGEIIK
510 520 530 540 550
EALHNPNLSV DEPLDVDYRF DFSDEIKEKI KKLSAKSLNE MLFRAQRTEV
560 570 580 590 600
AGMTAQINRK LLINSLYGAL GNVWFRYYDL RNATAITTFG QMALQWIERK
610 620 630 640 650
VNEYLNEVCG TEGEAFVLYG DTDSIYVSAD KIIDKVGESK FRDTNHWVDF
660 670 680 690 700
LDKFARERME PAIDRGFREM CEYMNNKQHL MFMDREAIAG PPLGSKGIGG
710 720 730 740 750
FWTGKKRYAL NVWDMEGTRY AEPKLKIMGL ETQKSSTPKA VQKALKECIR
760 770 780 790 800
RMLQEGEESL QEYFKEFEKE FRQLNYISIA SVSSANNIAK YDVGGFPGPK
810 820 830 840 850
CPFHIRGILT YNRAIKGNID APQVVEGEKV YVLPLREGNP FGDKCIAWPS
860 870 880 890 900
GTEITDLIKD DVLHWMDYTV LLEKTFIKPL EGFTSAAKLD YEKKASLFDM

FDF
Length:903
Mass (Da):104,613
Last modified:November 1, 1996 - v1
Checksum:iA3983FC16D4C0509
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U34036 Genomic DNA. Translation: AAA93077.1.
AY303349 Genomic DNA. Translation: AAP75958.1.
RefSeqiNP_861746.1. NC_004928.1.

Genome annotation databases

GeneIDi1494172.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U34036 Genomic DNA. Translation: AAA93077.1 .
AY303349 Genomic DNA. Translation: AAP75958.1 .
RefSeqi NP_861746.1. NC_004928.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1B1F model - R 387-892 [» ]
1B8H X-ray 3.00 D 893-903 [» ]
1CLQ X-ray 2.70 A 1-903 [» ]
1IG9 X-ray 2.60 A 1-903 [» ]
1IH7 X-ray 2.21 A 1-903 [» ]
1Q9X X-ray 2.69 A/B/C/D 1-903 [» ]
1Q9Y X-ray 2.80 A 1-903 [» ]
1QE4 model - F 1-903 [» ]
1WAF X-ray 3.20 A/B 1-903 [» ]
1WAG model - R 1-903 [» ]
1WAH model - R 1-903 [» ]
1WAI model - R 1-903 [» ]
1WAJ X-ray 2.80 A 1-903 [» ]
2ATQ X-ray 3.20 A 1-903 [» ]
2DTU X-ray 2.37 A/B/C/D 1-902 [» ]
2DY4 X-ray 2.65 A/B/C/D 1-903 [» ]
2OYQ X-ray 2.86 A/B/C/D 1-903 [» ]
2OZM X-ray 2.86 A 1-903 [» ]
2OZS X-ray 2.75 A 1-903 [» ]
2P5G X-ray 2.80 A/B/C/D 1-903 [» ]
2P5O X-ray 2.80 A/B/C/D 1-903 [» ]
3CFO X-ray 2.60 A 1-903 [» ]
3CFP X-ray 2.50 A 1-903 [» ]
3CFR X-ray 2.40 A 1-903 [» ]
3CQ8 X-ray 2.50 A 1-903 [» ]
3KD1 X-ray 2.66 E 1-903 [» ]
3KD5 X-ray 2.69 E 1-903 [» ]
3L8B X-ray 2.15 A/B 1-903 [» ]
3LDS X-ray 3.00 A 1-903 [» ]
3LZI X-ray 2.30 A 1-903 [» ]
3LZJ X-ray 2.05 A 1-903 [» ]
3NAE X-ray 2.00 A 1-903 [» ]
3NCI X-ray 1.79 A 1-903 [» ]
3NDK X-ray 2.00 A 1-903 [» ]
3NE6 X-ray 2.00 A 1-903 [» ]
3NGI X-ray 1.89 A 1-903 [» ]
3NHG X-ray 2.50 A 1-903 [» ]
3QEI X-ray 2.18 A 1-903 [» ]
3QEP X-ray 1.80 A 1-903 [» ]
3QER X-ray 1.96 A 1-903 [» ]
3QES X-ray 1.98 A 1-903 [» ]
3QET X-ray 2.08 A 1-903 [» ]
3QEV X-ray 1.77 A 1-903 [» ]
3QEW X-ray 1.84 A 1-903 [» ]
3QEX X-ray 1.73 A 1-903 [» ]
3QNN X-ray 1.92 A 1-901 [» ]
3QNO X-ray 1.88 A 1-901 [» ]
3RMA X-ray 2.84 A/B/C/D 1-903 [» ]
3RMB X-ray 2.65 A/B/C/D 1-903 [» ]
3RMC X-ray 3.00 A/B/C/D 1-903 [» ]
3RMD X-ray 2.98 A/B/C/D 1-903 [» ]
3RWU X-ray 2.33 A 1-901 [» ]
3S9H X-ray 1.95 A 1-903 [» ]
3SCX X-ray 2.35 A 1-901 [» ]
3SI6 X-ray 1.85 A 1-901 [» ]
3SJJ X-ray 2.38 A 1-901 [» ]
3SNN X-ray 2.00 A 1-901 [» ]
3SPY X-ray 2.14 A 1-901 [» ]
3SPZ X-ray 2.43 A 1-903 [» ]
3SQ0 X-ray 2.00 A 1-903 [» ]
3SQ1 X-ray 1.82 A 1-901 [» ]
3SQ2 X-ray 2.10 A 1-902 [» ]
3SQ4 X-ray 2.23 A 1-902 [» ]
3SUN X-ray 2.42 A 1-895 [» ]
3SUO X-ray 2.23 A 1-900 [» ]
3SUP X-ray 2.32 A 1-903 [» ]
3SUQ X-ray 3.15 A 1-897 [» ]
3TAB X-ray 2.80 A/B/C/D 1-903 [» ]
3TAE X-ray 2.71 A/B/C/D 1-903 [» ]
3TAF X-ray 3.00 A/B/C/D 1-903 [» ]
3TAG X-ray 2.95 A/B/C/D 1-903 [» ]
3UIQ X-ray 1.88 A 1-903 [» ]
4DTJ X-ray 1.90 A 1-901 [» ]
4DTM X-ray 1.95 A 1-901 [» ]
4DTN X-ray 1.96 A 1-903 [» ]
4DTO X-ray 2.05 A 1-903 [» ]
4DTP X-ray 2.05 A 1-903 [» ]
4DTR X-ray 2.04 A 1-903 [» ]
4DTS X-ray 1.96 A 1-903 [» ]
4DTU X-ray 1.86 A 1-903 [» ]
4DTX X-ray 1.84 A 1-903 [» ]
4DU1 X-ray 2.15 A 1-903 [» ]
4DU3 X-ray 2.02 A 1-903 [» ]
4DU4 X-ray 2.28 A 1-903 [» ]
4E3S X-ray 2.04 A 1-903 [» ]
4FJ5 X-ray 2.05 A 1-903 [» ]
4FJ7 X-ray 1.90 A 1-903 [» ]
4FJ8 X-ray 2.19 A 1-903 [» ]
4FJ9 X-ray 1.97 A 1-903 [» ]
4FJG X-ray 2.02 A 1-903 [» ]
4FJH X-ray 2.11 A 1-903 [» ]
4FJI X-ray 2.20 A 1-903 [» ]
4FJJ X-ray 1.99 A 1-903 [» ]
4FJK X-ray 2.00 A 1-903 [» ]
4FJL X-ray 1.87 A 1-903 [» ]
4FJM X-ray 2.02 A 1-903 [» ]
4FJN X-ray 1.98 A 1-903 [» ]
4FJX X-ray 2.11 A 1-903 [» ]
4FK0 X-ray 2.18 A 1-903 [» ]
4FK2 X-ray 1.98 A 1-903 [» ]
4FK4 X-ray 1.90 A 1-903 [» ]
4I9L X-ray 2.60 A 1-903 [» ]
4I9Q X-ray 2.30 A/B 1-903 [» ]
4J2A X-ray 1.80 A 1-901 [» ]
4J2B X-ray 2.04 A 1-901 [» ]
4J2D X-ray 1.76 A 1-901 [» ]
4J2E X-ray 2.02 A 1-901 [» ]
4KHN X-ray 2.55 A/B 1-903 [» ]
4KHQ X-ray 2.19 A 1-903 [» ]
4KHS X-ray 2.12 A 1-903 [» ]
4KHU X-ray 2.05 A 1-903 [» ]
4KHW X-ray 2.37 A 1-903 [» ]
4KHY X-ray 2.25 A 1-903 [» ]
4KI4 X-ray 2.45 A 1-903 [» ]
4KI6 X-ray 2.55 A 1-903 [» ]
4M3R X-ray 2.07 A 1-903 [» ]
4M3T X-ray 1.90 A 1-903 [» ]
4M3U X-ray 2.07 A 1-903 [» ]
4M3W X-ray 2.10 A 1-903 [» ]
4M3X X-ray 2.20 A 1-903 [» ]
4M3Y X-ray 1.86 A 1-903 [» ]
4M3Z X-ray 1.84 A 1-903 [» ]
4M41 X-ray 2.15 A 1-903 [» ]
4M42 X-ray 2.04 A 1-903 [» ]
4M45 X-ray 1.89 A 1-903 [» ]
ProteinModelPortali Q38087.
SMRi Q38087. Positions 1-903.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 1494172.

Enzyme and pathway databases

SABIO-RK Q38087.

Miscellaneous databases

EvolutionaryTracei Q38087.

Family and domain databases

Gene3Di 3.30.420.10. 1 hit.
3.90.1600.10. 2 hits.
InterProi IPR006172. DNA-dir_DNA_pol_B.
IPR017964. DNA-dir_DNA_pol_B_CS.
IPR006133. DNA-dir_DNA_pol_B_exonuc.
IPR006134. DNA-dir_DNA_pol_B_multi_dom.
IPR023211. DNA_pol_palm_dom.
IPR012337. RNaseH-like_dom.
[Graphical view ]
Pfami PF00136. DNA_pol_B. 1 hit.
PF03104. DNA_pol_B_exo1. 1 hit.
[Graphical view ]
PRINTSi PR00106. DNAPOLB.
SMARTi SM00486. POLBc. 1 hit.
[Graphical view ]
SUPFAMi SSF53098. SSF53098. 1 hit.
PROSITEi PS00116. DNA_POLYMERASE_B. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Modular organization of T4 DNA polymerase. Evidence from phylogenetics."
    Wang C.C., Yeh L.-S., Karam J.D.
    J. Biol. Chem. 270:26558-26564(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Enterobacteria phage RB69 complete genome."
    Petrov V., Nolan J., Chin D., Letarov A., Krisch H.M., Karam J.D.
    Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "Crystal structure of a pol alpha family replication DNA polymerase from bacteriophage RB69."
    Wang J., Sattar A.K., Wang C.C., Karam J.D., Konigsberg W.H., Steitz T.A.
    Cell 89:1087-1099(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS).
  4. "Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex."
    Shamoo Y., Steitz T.A.
    Cell 99:155-166(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS) OF COMPLEX WITH GP45.

Entry informationi

Entry nameiDPOL_BPR69
AccessioniPrimary (citable) accession number: Q38087
Secondary accession number(s): Q76XX8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: November 26, 2014
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3