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Q38087

- DPOL_BPR69

UniProt

Q38087 - DPOL_BPR69

Protein

DNA polymerase

Gene

43

Organism
Enterobacteria phage RB69 (Bacteriophage RB69)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 109 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    • Comment

    Functioni

    This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction.

    Catalytic activityi

    Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. DNA-directed DNA polymerase activity Source: UniProtKB-KW
    3. exonuclease activity Source: UniProtKB-KW
    4. nucleotide binding Source: InterPro

    Keywords - Molecular functioni

    DNA-directed DNA polymerase, Exonuclease, Hydrolase, Nuclease, Nucleotidyltransferase, Transferase

    Keywords - Biological processi

    DNA replication

    Keywords - Ligandi

    DNA-binding

    Enzyme and pathway databases

    SABIO-RKQ38087.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA polymerase (EC:2.7.7.7)
    Alternative name(s):
    Gp43
    Gene namesi
    Name:43
    OrganismiEnterobacteria phage RB69 (Bacteriophage RB69)
    Taxonomic identifieri12353 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesMyoviridaeTevenvirinaeT4likevirus
    Virus hostiEscherichia coli [TaxID: 562]
    ProteomesiUP000000876: Genome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 903903DNA polymerasePRO_0000046547Add
    BLAST

    Structurei

    Secondary structure

    1
    903
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi4 – 118
    Beta strandi14 – 207
    Beta strandi22 – 243
    Beta strandi26 – 316
    Beta strandi36 – 405
    Beta strandi43 – 453
    Beta strandi48 – 514
    Beta strandi56 – 616
    Helixi65 – 7814
    Beta strandi82 – 843
    Helixi88 – 969
    Helixi105 – 1073
    Beta strandi110 – 1167
    Beta strandi120 – 1234
    Turni126 – 1283
    Beta strandi135 – 1406
    Turni141 – 1444
    Beta strandi145 – 1517
    Beta strandi152 – 1565
    Helixi164 – 1685
    Helixi171 – 1733
    Turni176 – 1794
    Helixi180 – 1834
    Beta strandi186 – 1938
    Helixi194 – 20714
    Beta strandi211 – 2144
    Turni218 – 2214
    Helixi222 – 23413
    Helixi236 – 2394
    Helixi240 – 2423
    Beta strandi248 – 2558
    Beta strandi258 – 2658
    Beta strandi269 – 2724
    Helixi273 – 2808
    Helixi290 – 2989
    Helixi309 – 3113
    Helixi312 – 33827
    Helixi340 – 35112
    Helixi355 – 3595
    Helixi361 – 37414
    Turni375 – 3773
    Beta strandi402 – 4043
    Beta strandi405 – 4128
    Helixi415 – 4239
    Helixi427 – 4293
    Beta strandi430 – 4334
    Helixi439 – 4435
    Beta strandi452 – 4565
    Beta strandi460 – 4634
    Beta strandi465 – 4673
    Helixi470 – 50233
    Beta strandi503 – 5053
    Beta strandi507 – 5093
    Beta strandi518 – 5203
    Helixi524 – 5307
    Beta strandi531 – 5333
    Helixi535 – 56935
    Helixi580 – 60930
    Beta strandi617 – 6215
    Beta strandi624 – 6285
    Helixi630 – 6367
    Helixi638 – 6403
    Helixi644 – 65714
    Helixi659 – 67315
    Beta strandi683 – 6897
    Beta strandi693 – 6953
    Beta strandi700 – 7045
    Beta strandi707 – 7159
    Beta strandi718 – 73013
    Helixi731 – 7333
    Helixi739 – 75416
    Helixi757 – 77014
    Helixi771 – 7733
    Helixi776 – 7794
    Beta strandi781 – 7844
    Helixi789 – 7913
    Beta strandi792 – 7976
    Helixi803 – 81412
    Turni815 – 8173
    Beta strandi819 – 8213
    Beta strandi828 – 8358
    Beta strandi837 – 8393
    Beta strandi842 – 8498
    Helixi856 – 86510
    Helixi868 – 8758
    Helixi877 – 88711
    Beta strandi891 – 8944
    Helixi897 – 9004

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1B1Fmodel-R387-892[»]
    1B8HX-ray3.00D893-903[»]
    1CLQX-ray2.70A1-903[»]
    1IG9X-ray2.60A1-903[»]
    1IH7X-ray2.21A1-903[»]
    1Q9XX-ray2.69A/B/C/D1-903[»]
    1Q9YX-ray2.80A1-903[»]
    1QE4model-F1-903[»]
    1WAFX-ray3.20A/B1-903[»]
    1WAGmodel-R1-903[»]
    1WAHmodel-R1-903[»]
    1WAImodel-R1-903[»]
    1WAJX-ray2.80A1-903[»]
    2ATQX-ray3.20A1-903[»]
    2DTUX-ray2.37A/B/C/D1-902[»]
    2DY4X-ray2.65A/B/C/D1-903[»]
    2OYQX-ray2.86A/B/C/D1-903[»]
    2OZMX-ray2.86A1-903[»]
    2OZSX-ray2.75A1-903[»]
    2P5GX-ray2.80A/B/C/D1-903[»]
    2P5OX-ray2.80A/B/C/D1-903[»]
    3CFOX-ray2.60A1-903[»]
    3CFPX-ray2.50A1-903[»]
    3CFRX-ray2.40A1-903[»]
    3CQ8X-ray2.50A1-903[»]
    3KD1X-ray2.66E1-903[»]
    3KD5X-ray2.69E1-903[»]
    3L8BX-ray2.15A/B1-903[»]
    3LDSX-ray3.00A1-903[»]
    3LZIX-ray2.30A1-903[»]
    3LZJX-ray2.05A1-903[»]
    3NAEX-ray2.00A1-903[»]
    3NCIX-ray1.79A1-903[»]
    3NDKX-ray2.00A1-903[»]
    3NE6X-ray2.00A1-903[»]
    3NGIX-ray1.89A1-903[»]
    3NHGX-ray2.50A1-903[»]
    3QEIX-ray2.18A1-903[»]
    3QEPX-ray1.80A1-903[»]
    3QERX-ray1.96A1-903[»]
    3QESX-ray1.98A1-903[»]
    3QETX-ray2.08A1-903[»]
    3QEVX-ray1.77A1-903[»]
    3QEWX-ray1.84A1-903[»]
    3QEXX-ray1.73A1-903[»]
    3QNNX-ray1.92A1-901[»]
    3QNOX-ray1.88A1-901[»]
    3RMAX-ray2.84A/B/C/D1-903[»]
    3RMBX-ray2.65A/B/C/D1-903[»]
    3RMCX-ray3.00A/B/C/D1-903[»]
    3RMDX-ray2.98A/B/C/D1-903[»]
    3RWUX-ray2.33A1-901[»]
    3S9HX-ray1.95A1-903[»]
    3SCXX-ray2.35A1-901[»]
    3SI6X-ray1.85A1-901[»]
    3SJJX-ray2.38A1-901[»]
    3SNNX-ray2.00A1-901[»]
    3SPYX-ray2.14A1-901[»]
    3SPZX-ray2.43A1-903[»]
    3SQ0X-ray2.00A1-903[»]
    3SQ1X-ray1.82A1-901[»]
    3SQ2X-ray2.10A1-902[»]
    3SQ4X-ray2.23A1-902[»]
    3SUNX-ray2.42A1-895[»]
    3SUOX-ray2.23A1-900[»]
    3SUPX-ray2.32A1-903[»]
    3SUQX-ray3.15A1-897[»]
    3TABX-ray2.80A/B/C/D1-903[»]
    3TAEX-ray2.71A/B/C/D1-903[»]
    3TAFX-ray3.00A/B/C/D1-903[»]
    3TAGX-ray2.95A/B/C/D1-903[»]
    3UIQX-ray1.88A1-903[»]
    4DTJX-ray1.90A1-901[»]
    4DTMX-ray1.95A1-901[»]
    4DTNX-ray1.96A1-903[»]
    4DTOX-ray2.05A1-903[»]
    4DTPX-ray2.05A1-903[»]
    4DTRX-ray2.04A1-903[»]
    4DTSX-ray1.96A1-903[»]
    4DTUX-ray1.86A1-903[»]
    4DTXX-ray1.84A1-903[»]
    4DU1X-ray2.15A1-903[»]
    4DU3X-ray2.02A1-903[»]
    4DU4X-ray2.28A1-903[»]
    4E3SX-ray2.04A1-903[»]
    4FJ5X-ray2.05A1-903[»]
    4FJ7X-ray1.90A1-903[»]
    4FJ8X-ray2.19A1-903[»]
    4FJ9X-ray1.97A1-903[»]
    4FJGX-ray2.02A1-903[»]
    4FJHX-ray2.11A1-903[»]
    4FJIX-ray2.20A1-903[»]
    4FJJX-ray1.99A1-903[»]
    4FJKX-ray2.00A1-903[»]
    4FJLX-ray1.87A1-903[»]
    4FJMX-ray2.02A1-903[»]
    4FJNX-ray1.98A1-903[»]
    4FJXX-ray2.11A1-903[»]
    4FK0X-ray2.18A1-903[»]
    4FK2X-ray1.98A1-903[»]
    4FK4X-ray1.90A1-903[»]
    4I9LX-ray2.60A1-903[»]
    4I9QX-ray2.30A/B1-903[»]
    4J2AX-ray1.80A1-901[»]
    4J2BX-ray2.04A1-901[»]
    4J2DX-ray1.76A1-901[»]
    4J2EX-ray2.02A1-901[»]
    4KHNX-ray2.55A/B1-903[»]
    4KHQX-ray2.19A1-903[»]
    4KHSX-ray2.12A1-903[»]
    4KHUX-ray2.05A1-903[»]
    4KHWX-ray2.37A1-903[»]
    4KHYX-ray2.25A1-903[»]
    4KI4X-ray2.45A1-903[»]
    4KI6X-ray2.55A1-903[»]
    4M3RX-ray2.07A1-903[»]
    4M3TX-ray1.90A1-903[»]
    4M3UX-ray2.07A1-903[»]
    4M3WX-ray2.10A1-903[»]
    4M3XX-ray2.20A1-903[»]
    4M3YX-ray1.86A1-903[»]
    4M3ZX-ray1.84A1-903[»]
    4M41X-ray2.15A1-903[»]
    4M42X-ray2.04A1-903[»]
    4M45X-ray1.89A1-903[»]
    ProteinModelPortaliQ38087.
    SMRiQ38087. Positions 1-903.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ38087.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the DNA polymerase type-B family.Curated

    Family and domain databases

    Gene3Di3.30.420.10. 1 hit.
    3.90.1600.10. 2 hits.
    InterProiIPR006172. DNA-dir_DNA_pol_B.
    IPR017964. DNA-dir_DNA_pol_B_CS.
    IPR006133. DNA-dir_DNA_pol_B_exonuc.
    IPR006134. DNA-dir_DNA_pol_B_multi_dom.
    IPR023211. DNA_pol_palm_dom.
    IPR012337. RNaseH-like_dom.
    [Graphical view]
    PfamiPF00136. DNA_pol_B. 1 hit.
    PF03104. DNA_pol_B_exo1. 1 hit.
    [Graphical view]
    PRINTSiPR00106. DNAPOLB.
    SMARTiSM00486. POLBc. 1 hit.
    [Graphical view]
    SUPFAMiSSF53098. SSF53098. 1 hit.
    PROSITEiPS00116. DNA_POLYMERASE_B. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q38087-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKEFYLTVEQ IGDSIFERYI DSNGRERTRE VEYKPSLFAH CPESQATKYF    50
    DIYGKPCTRK LFANMRDASQ WIKRMEDIGL EALGMDDFKL AYLSDTYNYE 100
    IKYDHTKIRV ANFDIEVTSP DGFPEPSQAK HPIDAITHYD SIDDRFYVFD 150
    LLNSPYGNVE EWSIEIAAKL QEQGGDEVPS EIIDKIIYMP FDNEKELLME 200
    YLNFWQQKTP VILTGWNVES FDIPYVYNRI KNIFGESTAK RLSPHRKTRV 250
    KVIENMYGSR EIITLFGISV LDYIDLYKKF SFTNQPSYSL DYISEFELNV 300
    GKLKYDGPIS KLRESNHQRY ISYNIIDVYR VLQIDAKRQF INLSLDMGYY 350
    AKIQIQSVFS PIKTWDAIIF NSLKEQNKVI PQGRSHPVQP YPGAFVKEPI 400
    PNRYKYVMSF DLTSLYPSII RQVNISPETI AGTFKVAPLH DYINAVAERP 450
    SDVYSCSPNG MMYYKDRDGV VPTEITKVFN QRKEHKGYML AAQRNGEIIK 500
    EALHNPNLSV DEPLDVDYRF DFSDEIKEKI KKLSAKSLNE MLFRAQRTEV 550
    AGMTAQINRK LLINSLYGAL GNVWFRYYDL RNATAITTFG QMALQWIERK 600
    VNEYLNEVCG TEGEAFVLYG DTDSIYVSAD KIIDKVGESK FRDTNHWVDF 650
    LDKFARERME PAIDRGFREM CEYMNNKQHL MFMDREAIAG PPLGSKGIGG 700
    FWTGKKRYAL NVWDMEGTRY AEPKLKIMGL ETQKSSTPKA VQKALKECIR 750
    RMLQEGEESL QEYFKEFEKE FRQLNYISIA SVSSANNIAK YDVGGFPGPK 800
    CPFHIRGILT YNRAIKGNID APQVVEGEKV YVLPLREGNP FGDKCIAWPS 850
    GTEITDLIKD DVLHWMDYTV LLEKTFIKPL EGFTSAAKLD YEKKASLFDM 900
    FDF 903
    Length:903
    Mass (Da):104,613
    Last modified:November 1, 1996 - v1
    Checksum:iA3983FC16D4C0509
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U34036 Genomic DNA. Translation: AAA93077.1.
    AY303349 Genomic DNA. Translation: AAP75958.1.
    RefSeqiNP_861746.1. NC_004928.1.

    Genome annotation databases

    GeneIDi1494172.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U34036 Genomic DNA. Translation: AAA93077.1 .
    AY303349 Genomic DNA. Translation: AAP75958.1 .
    RefSeqi NP_861746.1. NC_004928.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1B1F model - R 387-892 [» ]
    1B8H X-ray 3.00 D 893-903 [» ]
    1CLQ X-ray 2.70 A 1-903 [» ]
    1IG9 X-ray 2.60 A 1-903 [» ]
    1IH7 X-ray 2.21 A 1-903 [» ]
    1Q9X X-ray 2.69 A/B/C/D 1-903 [» ]
    1Q9Y X-ray 2.80 A 1-903 [» ]
    1QE4 model - F 1-903 [» ]
    1WAF X-ray 3.20 A/B 1-903 [» ]
    1WAG model - R 1-903 [» ]
    1WAH model - R 1-903 [» ]
    1WAI model - R 1-903 [» ]
    1WAJ X-ray 2.80 A 1-903 [» ]
    2ATQ X-ray 3.20 A 1-903 [» ]
    2DTU X-ray 2.37 A/B/C/D 1-902 [» ]
    2DY4 X-ray 2.65 A/B/C/D 1-903 [» ]
    2OYQ X-ray 2.86 A/B/C/D 1-903 [» ]
    2OZM X-ray 2.86 A 1-903 [» ]
    2OZS X-ray 2.75 A 1-903 [» ]
    2P5G X-ray 2.80 A/B/C/D 1-903 [» ]
    2P5O X-ray 2.80 A/B/C/D 1-903 [» ]
    3CFO X-ray 2.60 A 1-903 [» ]
    3CFP X-ray 2.50 A 1-903 [» ]
    3CFR X-ray 2.40 A 1-903 [» ]
    3CQ8 X-ray 2.50 A 1-903 [» ]
    3KD1 X-ray 2.66 E 1-903 [» ]
    3KD5 X-ray 2.69 E 1-903 [» ]
    3L8B X-ray 2.15 A/B 1-903 [» ]
    3LDS X-ray 3.00 A 1-903 [» ]
    3LZI X-ray 2.30 A 1-903 [» ]
    3LZJ X-ray 2.05 A 1-903 [» ]
    3NAE X-ray 2.00 A 1-903 [» ]
    3NCI X-ray 1.79 A 1-903 [» ]
    3NDK X-ray 2.00 A 1-903 [» ]
    3NE6 X-ray 2.00 A 1-903 [» ]
    3NGI X-ray 1.89 A 1-903 [» ]
    3NHG X-ray 2.50 A 1-903 [» ]
    3QEI X-ray 2.18 A 1-903 [» ]
    3QEP X-ray 1.80 A 1-903 [» ]
    3QER X-ray 1.96 A 1-903 [» ]
    3QES X-ray 1.98 A 1-903 [» ]
    3QET X-ray 2.08 A 1-903 [» ]
    3QEV X-ray 1.77 A 1-903 [» ]
    3QEW X-ray 1.84 A 1-903 [» ]
    3QEX X-ray 1.73 A 1-903 [» ]
    3QNN X-ray 1.92 A 1-901 [» ]
    3QNO X-ray 1.88 A 1-901 [» ]
    3RMA X-ray 2.84 A/B/C/D 1-903 [» ]
    3RMB X-ray 2.65 A/B/C/D 1-903 [» ]
    3RMC X-ray 3.00 A/B/C/D 1-903 [» ]
    3RMD X-ray 2.98 A/B/C/D 1-903 [» ]
    3RWU X-ray 2.33 A 1-901 [» ]
    3S9H X-ray 1.95 A 1-903 [» ]
    3SCX X-ray 2.35 A 1-901 [» ]
    3SI6 X-ray 1.85 A 1-901 [» ]
    3SJJ X-ray 2.38 A 1-901 [» ]
    3SNN X-ray 2.00 A 1-901 [» ]
    3SPY X-ray 2.14 A 1-901 [» ]
    3SPZ X-ray 2.43 A 1-903 [» ]
    3SQ0 X-ray 2.00 A 1-903 [» ]
    3SQ1 X-ray 1.82 A 1-901 [» ]
    3SQ2 X-ray 2.10 A 1-902 [» ]
    3SQ4 X-ray 2.23 A 1-902 [» ]
    3SUN X-ray 2.42 A 1-895 [» ]
    3SUO X-ray 2.23 A 1-900 [» ]
    3SUP X-ray 2.32 A 1-903 [» ]
    3SUQ X-ray 3.15 A 1-897 [» ]
    3TAB X-ray 2.80 A/B/C/D 1-903 [» ]
    3TAE X-ray 2.71 A/B/C/D 1-903 [» ]
    3TAF X-ray 3.00 A/B/C/D 1-903 [» ]
    3TAG X-ray 2.95 A/B/C/D 1-903 [» ]
    3UIQ X-ray 1.88 A 1-903 [» ]
    4DTJ X-ray 1.90 A 1-901 [» ]
    4DTM X-ray 1.95 A 1-901 [» ]
    4DTN X-ray 1.96 A 1-903 [» ]
    4DTO X-ray 2.05 A 1-903 [» ]
    4DTP X-ray 2.05 A 1-903 [» ]
    4DTR X-ray 2.04 A 1-903 [» ]
    4DTS X-ray 1.96 A 1-903 [» ]
    4DTU X-ray 1.86 A 1-903 [» ]
    4DTX X-ray 1.84 A 1-903 [» ]
    4DU1 X-ray 2.15 A 1-903 [» ]
    4DU3 X-ray 2.02 A 1-903 [» ]
    4DU4 X-ray 2.28 A 1-903 [» ]
    4E3S X-ray 2.04 A 1-903 [» ]
    4FJ5 X-ray 2.05 A 1-903 [» ]
    4FJ7 X-ray 1.90 A 1-903 [» ]
    4FJ8 X-ray 2.19 A 1-903 [» ]
    4FJ9 X-ray 1.97 A 1-903 [» ]
    4FJG X-ray 2.02 A 1-903 [» ]
    4FJH X-ray 2.11 A 1-903 [» ]
    4FJI X-ray 2.20 A 1-903 [» ]
    4FJJ X-ray 1.99 A 1-903 [» ]
    4FJK X-ray 2.00 A 1-903 [» ]
    4FJL X-ray 1.87 A 1-903 [» ]
    4FJM X-ray 2.02 A 1-903 [» ]
    4FJN X-ray 1.98 A 1-903 [» ]
    4FJX X-ray 2.11 A 1-903 [» ]
    4FK0 X-ray 2.18 A 1-903 [» ]
    4FK2 X-ray 1.98 A 1-903 [» ]
    4FK4 X-ray 1.90 A 1-903 [» ]
    4I9L X-ray 2.60 A 1-903 [» ]
    4I9Q X-ray 2.30 A/B 1-903 [» ]
    4J2A X-ray 1.80 A 1-901 [» ]
    4J2B X-ray 2.04 A 1-901 [» ]
    4J2D X-ray 1.76 A 1-901 [» ]
    4J2E X-ray 2.02 A 1-901 [» ]
    4KHN X-ray 2.55 A/B 1-903 [» ]
    4KHQ X-ray 2.19 A 1-903 [» ]
    4KHS X-ray 2.12 A 1-903 [» ]
    4KHU X-ray 2.05 A 1-903 [» ]
    4KHW X-ray 2.37 A 1-903 [» ]
    4KHY X-ray 2.25 A 1-903 [» ]
    4KI4 X-ray 2.45 A 1-903 [» ]
    4KI6 X-ray 2.55 A 1-903 [» ]
    4M3R X-ray 2.07 A 1-903 [» ]
    4M3T X-ray 1.90 A 1-903 [» ]
    4M3U X-ray 2.07 A 1-903 [» ]
    4M3W X-ray 2.10 A 1-903 [» ]
    4M3X X-ray 2.20 A 1-903 [» ]
    4M3Y X-ray 1.86 A 1-903 [» ]
    4M3Z X-ray 1.84 A 1-903 [» ]
    4M41 X-ray 2.15 A 1-903 [» ]
    4M42 X-ray 2.04 A 1-903 [» ]
    4M45 X-ray 1.89 A 1-903 [» ]
    ProteinModelPortali Q38087.
    SMRi Q38087. Positions 1-903.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1494172.

    Enzyme and pathway databases

    SABIO-RK Q38087.

    Miscellaneous databases

    EvolutionaryTracei Q38087.

    Family and domain databases

    Gene3Di 3.30.420.10. 1 hit.
    3.90.1600.10. 2 hits.
    InterProi IPR006172. DNA-dir_DNA_pol_B.
    IPR017964. DNA-dir_DNA_pol_B_CS.
    IPR006133. DNA-dir_DNA_pol_B_exonuc.
    IPR006134. DNA-dir_DNA_pol_B_multi_dom.
    IPR023211. DNA_pol_palm_dom.
    IPR012337. RNaseH-like_dom.
    [Graphical view ]
    Pfami PF00136. DNA_pol_B. 1 hit.
    PF03104. DNA_pol_B_exo1. 1 hit.
    [Graphical view ]
    PRINTSi PR00106. DNAPOLB.
    SMARTi SM00486. POLBc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53098. SSF53098. 1 hit.
    PROSITEi PS00116. DNA_POLYMERASE_B. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Modular organization of T4 DNA polymerase. Evidence from phylogenetics."
      Wang C.C., Yeh L.-S., Karam J.D.
      J. Biol. Chem. 270:26558-26564(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Enterobacteria phage RB69 complete genome."
      Petrov V., Nolan J., Chin D., Letarov A., Krisch H.M., Karam J.D.
      Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. "Crystal structure of a pol alpha family replication DNA polymerase from bacteriophage RB69."
      Wang J., Sattar A.K., Wang C.C., Karam J.D., Konigsberg W.H., Steitz T.A.
      Cell 89:1087-1099(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS).
    4. "Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex."
      Shamoo Y., Steitz T.A.
      Cell 99:155-166(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS) OF COMPLEX WITH GP45.

    Entry informationi

    Entry nameiDPOL_BPR69
    AccessioniPrimary (citable) accession number: Q38087
    Secondary accession number(s): Q76XX8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 15, 1998
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 109 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3