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Protein

Probable protein phosphatase 2C 71

Gene

Os10g0370000

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi254 – 2541Manganese 1By similarity
Metal bindingi254 – 2541Manganese 2By similarity
Metal bindingi255 – 2551Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi384 – 3841Manganese 2By similarity
Metal bindingi451 – 4511Manganese 2By similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 71 (EC:3.1.3.16)
Short name:
OsPP2C71
Gene namesi
Ordered Locus Names:Os10g0370000, LOC_Os10g22460
ORF Names:OJ1003C07.6, OsJ_030057
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
ProteomesiUP000000763 Componenti: Chromosome 10

Organism-specific databases

GrameneiQ339D2.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 465465Probable protein phosphatase 2C 71PRO_0000363318Add
BLAST

Proteomic databases

PRIDEiQ339D2.

Expressioni

Gene expression databases

ExpressionAtlasiQ339D2. baseline.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os10g22460.1.

Structurei

3D structure databases

ProteinModelPortaliQ339D2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini222 – 460239PPM-type phosphatasePROSITE-ProRule annotationAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi20 – 278Poly-Pro
Compositional biasi101 – 1055Poly-Ala

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PPM-type phosphatase domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000077674.
InParanoidiQ339D2.
OMAiKFITENQ.

Family and domain databases

Gene3Di3.60.40.10. 2 hits.
InterProiIPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS51746. PPM_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q339D2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAELPLAAGL LDLRPCKLAP PPPPPLPVSP SPRHHRRPHS TATACRAAPD
60 70 80 90 100
LHSSTELADG SIVFRFARPR DDDDEEQQQR RADAVAPEAA AVVESGLDGD
110 120 130 140 150
AAAAAEPEAR DGGGEGEVTA TATGLDAEEV VASGGAEATA TSGLEDAGEE
160 170 180 190 200
ASDGSTARDS DTDVDTESSA STAADDDQPA EFAVPPPPAE EVCNKVDWEK
210 220 230 240 250
DTSEVKNTDR MVPVASSTLV LASGAAILPH PSKAATGGED AYFIACDGWF
260 270 280 290 300
GVADGVGQWS FEGINAGLYA RELMDGCKKF IMENQGAADI KPEQVLSKAA
310 320 330 340 350
DEAHSPGSST VLVAHFDGQF LNASNIGDSG FLVIRNGEVY QKSKPMVYGF
360 370 380 390 400
NFPLQIEKGD NPLKLVQNYT IELEDGDVIV TASDGLFDNV YEQEVATMVS
410 420 430 440 450
KSLQADLKPT EIAEHLAAKA QEVGRSAAGS TPFSDAALAV GYLGFSGGKL
460
DDIAVVVSIV RKSEI
Length:465
Mass (Da):48,493
Last modified:December 6, 2005 - v1
Checksum:iCFE9CAD3986915FB
GO

Sequence cautioni

The sequence AAM08826.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC113335 Genomic DNA. Translation: AAM08826.1. Sequence problems.
DP000086 Genomic DNA. Translation: ABB47348.1.
AP008216 Genomic DNA. Translation: BAF26369.1.
CM000147 Genomic DNA. No translation available.
AK100049 mRNA. Translation: BAG94416.1.
RefSeqiNP_001064455.1. NM_001070990.1.
UniGeneiOs.46691.

Genome annotation databases

EnsemblPlantsiOS10T0370000-01; OS10T0370000-01; OS10G0370000.
OS10T0370000-02; OS10T0370000-02; OS10G0370000.
GeneIDi4348468.
KEGGiosa:4348468.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC113335 Genomic DNA. Translation: AAM08826.1. Sequence problems.
DP000086 Genomic DNA. Translation: ABB47348.1.
AP008216 Genomic DNA. Translation: BAF26369.1.
CM000147 Genomic DNA. No translation available.
AK100049 mRNA. Translation: BAG94416.1.
RefSeqiNP_001064455.1. NM_001070990.1.
UniGeneiOs.46691.

3D structure databases

ProteinModelPortaliQ339D2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os10g22460.1.

Proteomic databases

PRIDEiQ339D2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS10T0370000-01; OS10T0370000-01; OS10G0370000.
OS10T0370000-02; OS10T0370000-02; OS10G0370000.
GeneIDi4348468.
KEGGiosa:4348468.

Organism-specific databases

GrameneiQ339D2.

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000077674.
InParanoidiQ339D2.
OMAiKFITENQ.

Gene expression databases

ExpressionAtlasiQ339D2. baseline.

Family and domain databases

Gene3Di3.60.40.10. 2 hits.
InterProiIPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS51746. PPM_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "In-depth view of structure, activity, and evolution of rice chromosome 10."
    Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S., Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D., Oates R., Palmer M., Pries G., Gibson J., Anderson H.
    , Paradkar M., Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F., Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M., Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R., Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F., Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D., Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R., Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K., Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S., Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S., Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R., Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M., Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R., Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E., Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.
    Science 300:1566-1569(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  6. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C71_ORYSJ
AccessioniPrimary (citable) accession number: Q339D2
Secondary accession number(s): A3C435, Q8S5N3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: December 6, 2005
Last modified: June 24, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.