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Protein

Cyclin-dependent kinase E-1

Gene

CDKE-1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.
ATP + [DNA-directed RNA polymerase] = ADP + [DNA-directed RNA polymerase] phosphate.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei59ATPPROSITE-ProRule annotation1
Active sitei158Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi25 – 33ATPPROSITE-ProRule annotation9

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionKinase, Serine/threonine-protein kinase, Transferase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cyclin-dependent kinase E-1 (EC:2.7.11.22, EC:2.7.11.23)
Short name:
CDKE;1
Gene namesi
Name:CDKE-1
Ordered Locus Names:Os10g0580300, LOC_Os10g42950
ORF Names:OsJ_32608Imported, OSJNBa0056G17.11
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 10

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002961041 – 475Cyclin-dependent kinase E-1Add BLAST475

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei29PhosphothreonineBy similarity1
Modified residuei30PhosphotyrosineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ336M2
PRIDEiQ336M2

Expressioni

Inductioni

By auxin. Down-regulated by cytokinin.1 Publication

Gene expression databases

ExpressionAtlasiQ336M2 differential
GenevisibleiQ336M2 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os10g42950.1

Structurei

3D structure databases

ProteinModelPortaliQ336M2
SMRiQ336M2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini19 – 337Protein kinasePROSITE-ProRule annotationAdd BLAST319

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0666 Eukaryota
ENOG410XPPA LUCA
HOGENOMiHOG000233024
InParanoidiQ336M2
KOiK02208
OMAiKSIYMVF
OrthoDBiEOG09360AQR

Family and domain databases

InterProiView protein in InterPro
IPR011009 Kinase-like_dom_sf
IPR000719 Prot_kinase_dom
IPR008271 Ser/Thr_kinase_AS
PfamiView protein in Pfam
PF00069 Pkinase, 1 hit
SMARTiView protein in SMART
SM00220 S_TKc, 1 hit
SUPFAMiSSF56112 SSF56112, 1 hit
PROSITEiView protein in PROSITE
PS50011 PROTEIN_KINASE_DOM, 1 hit
PS00108 PROTEIN_KINASE_ST, 1 hit

Sequencei

Sequence statusi: Complete.

Q336M2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDGRVGGGT NRPAWLQQYE LVGKIGEGTY GLVFLARLKQ SHPHAAAGVG
60 70 80 90 100
RRGSPIAIKK FKQSKEGDGV SPTAIREIML LREINHENVV KLVNVHINHA
110 120 130 140 150
DMSLYLAFDY AEHDLYEIIR HHREKLNLPI NPYTVKSLLW QLLNGLNYLH
160 170 180 190 200
SNWIIHRDLK PSNILVMGEG EEHGIIKIAD FGLARIYQAP LKPLSDNGVV
210 220 230 240 250
VTIWYRAPEL LLGAKHYTSA VDMWAVGCIF AELLTLKPLF QGVEAKATPN
260 270 280 290 300
PFQLDQLDKI FKVLGHPTVE KWPTLANLPC WQNDQQHIQG HKYENTGLHN
310 320 330 340 350
IVHLPQKSPA FDLLSKMLEY DPRKRITAAQ ALEHEYFRMD PLPGRNALLP
360 370 380 390 400
SQAGEKIVQY PVRPVDTTTD FEGTTSLQPT QAPSGNAAPG NQSVVPRPIP
410 420 430 440 450
RQMQQPMVGM SRMGGTNMAA FGAAPQGGIA GMNPGNIPMQ RGAGAQSHPH
460 470
QLRRKADQGM GMQNPGYPTQ QKRRF
Length:475
Mass (Da):52,808
Last modified:August 22, 2006 - v2
Checksum:iD7CD5C959C39C349
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC018727 Genomic DNA Translation: AAG46164.1
DP000086 Genomic DNA Translation: ABB48043.2
AP008216 Genomic DNA Translation: BAF27349.1
AP014966 Genomic DNA Translation: BAT12249.1
CM000147 Genomic DNA Translation: EEE51472.1
AK066824 mRNA Translation: BAG90141.1
RefSeqiXP_015614383.1, XM_015758897.1
UniGeneiOs.2989
Os.50198

Genome annotation databases

EnsemblPlantsiOs10t0580300-01; Os10t0580300-01; Os10g0580300
GeneIDi4349519
GrameneiOs10t0580300-01; Os10t0580300-01; Os10g0580300
KEGGiosa:4349519

Similar proteinsi

Entry informationi

Entry nameiCDKE1_ORYSJ
AccessioniPrimary (citable) accession number: Q336M2
Secondary accession number(s): B7ECP4, Q9FRN5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: August 22, 2006
Last modified: May 23, 2018
This is version 102 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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