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Protein
Submitted name:

NADH dehydrogenase

Gene

ndhF

Organism
Megaliabum pringlei
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol.SAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseSAAS annotation

Keywords - Ligandi

NADSAAS annotation, NADPSAAS annotation, PlastoquinoneSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
NADH dehydrogenaseImported
Gene namesi
Name:ndhFImported
Encoded oniPlastid; ChloroplastImported
OrganismiMegaliabum pringleiImported
Taxonomic identifieri41637 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsAsteralesAsteraceaeCichorioideaeLiabeaeMegaliabum

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 28HelicalSequence analysisAdd BLAST23
Transmembranei40 – 60HelicalSequence analysisAdd BLAST21
Transmembranei85 – 109HelicalSequence analysisAdd BLAST25
Transmembranei121 – 139HelicalSequence analysisAdd BLAST19
Transmembranei145 – 166HelicalSequence analysisAdd BLAST22
Transmembranei187 – 203HelicalSequence analysisAdd BLAST17
Transmembranei223 – 242HelicalSequence analysisAdd BLAST20
Transmembranei263 – 287HelicalSequence analysisAdd BLAST25
Transmembranei293 – 311HelicalSequence analysisAdd BLAST19
Transmembranei327 – 348HelicalSequence analysisAdd BLAST22
Transmembranei396 – 417HelicalSequence analysisAdd BLAST22
Transmembranei429 – 451HelicalSequence analysisAdd BLAST23
Transmembranei548 – 569HelicalSequence analysisAdd BLAST22
Transmembranei604 – 622HelicalSequence analysisAdd BLAST19
Transmembranei721 – 739HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

ChloroplastImported, Membrane, Plastid

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini72 – 129Proton_antipo_NInterPro annotationAdd BLAST58
Domaini141 – 442Proton_antipo_MInterPro annotationAdd BLAST302
Domaini448 – 688Proton_antipo_CInterPro annotationAdd BLAST241

Sequence similaritiesi

Belongs to the complex I subunit 5 family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Family and domain databases

InterProiIPR002128. NADH_UbQ_OxRdtase_chlpt_su5_C.
IPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
IPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF01010. Proton_antipo_C. 1 hit.
PF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.

Sequencei

Sequence statusi: Complete.

Q33144-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQTYQYAWI IPFLPLPVPM LIGLGLLLFP TATKSLRRMW AFQSVLLLSI
60 70 80 90 100
VMIFSMNLSI QQINSSSVYQ YVWSWIINND LSLEFGYLID PLTSIMSILI
110 120 130 140 150
TTVGIMVLIY SDNYMSHDHG YLRFFAYMSF FSTSMLGLVT SSNLIQIYIF
160 170 180 190 200
WELVGMCSYL LIGFWFTRPV AAKACQKAFV TNRVGDFGLL LGILGFYWIT
210 220 230 240 250
GSFEFRDLFQ IFNNLISNNE VNFLFVTLCA VLLFAGAIAK SAQFPLHVWL
260 270 280 290 300
PDAMEGPTPI SALIHAATMV AAGIFLVARL LPLFIVIPHI MNFISLIGII
310 320 330 340 350
TVFLGATLAL AQKDIKRGLA YSTMSQLGYM MLALGMGSYR SALFHLITHA
360 370 380 390 400
YSKALLFLGS GSVIHSMETL VGYCPKKSQN MVLMGGLTKH VPITKNSFLL
410 420 430 440 450
GTLSLCGIPP LACFWSKDEI LNDSWLYSPI FAIIAWSTAG LTAFYMCRIY
460 470 480 490 500
LLTFEGHLNV HFQNYSGKRN TPFDSISLWG KEGSKISKKN FRLVTLLKMK
510 520 530 540 550
KNGRPSFFSN KVYKLDENVR NRIQPFLSIL HFGNTKTYSY PYESDNTMLV
560 570 580 590 600
PILILILFTL FVGFLGIPFN QDVDILSKWL TPSINLLHKN SNNSIDWYEF
610 620 630 640 650
CKDAGFSVSI ASFGIFIAFF LYKPVYSSFQ NLDLINSFVK MGPKRIFSDK
660 670 680 690 700
ITNAIYDWSY NRGYIDAFYG TFLTVGMRKL AEFAHFFDRR IIDAIPNGVG
710 720 730 740
LIGFFVAEVI KSVGGGRISS YLFFYFSYVL IFLLIYYFFN L
Length:741
Mass (Da):84,050
Last modified:November 1, 1996 - v1
Checksum:i0AB48BE9048B50B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39422 Genomic DNA. Translation: AAC37774.1.
PIRiT13705.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39422 Genomic DNA. Translation: AAC37774.1.
PIRiT13705.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR002128. NADH_UbQ_OxRdtase_chlpt_su5_C.
IPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
IPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF01010. Proton_antipo_C. 1 hit.
PF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ33144_9ASTR
AccessioniPrimary (citable) accession number: Q33144
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 5, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.