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Q32Q88

- Q32Q88_RAT

UniProt

Q32Q88 - Q32Q88_RAT

Protein
Submitted name:

F-box protein 22

Gene

Fbxo22

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (06 Dec 2005)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. cellular response to starvation Source: Ensembl
    2. nucleocytoplasmic transport Source: Ensembl
    3. positive regulation of proteasomal ubiquitin-dependent protein catabolic process Source: Ensembl
    4. positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process Source: Ensembl
    5. protein polyubiquitination Source: Ensembl
    6. regulation of skeletal muscle fiber development Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    F-box protein 22Imported
    Submitted name:
    Protein Fbxo22Imported
    Submitted name:
    RCG58340, isoform CRA_bImported
    Gene namesi
    Name:Fbxo22Imported
    ORF Names:rCG_58340Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 8

    Organism-specific databases

    RGDi1306664. Fbxo22.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: Ensembl
    2. nucleus Source: Ensembl

    Expressioni

    Gene expression databases

    GenevestigatoriQ32Q88.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000020309.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG26261.
    GeneTreeiENSGT00390000013049.
    HOGENOMiHOG000285967.
    HOVERGENiHBG051570.
    InParanoidiQ32Q88.
    KOiK10302.
    OMAiCCKVGAS.
    OrthoDBiEOG72G17J.
    TreeFamiTF328809.

    Family and domain databases

    InterProiIPR001810. F-box_dom.
    IPR019494. FIST_C_domain.
    [Graphical view]
    PfamiPF00646. F-box. 1 hit.
    PF10442. FIST_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF81383. SSF81383. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q32Q88-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEPAGGGSSS TDPRGTYVLS NLAEVVERVF TFLPAKALLR VAGVCRLWRE    50
    CVRRVLRTHR SVTWISAGVA EAGHLEGHCL VRVVAEALEN VRILPRTVLY 100
    MADSETFISL EECRGHKRAR KRTTMETACA LEKLFPKQCQ VLGIVTPGIV 150
    VTPMGSGSNR PQEIEIGESG FALLFPQIEG IKIQPFHFIK DPKNLTLERH 200
    QLTEVGLLDN PELRVVLVFG YNCCKVGASN YLHRVVSTFS NMNIILAGGQ 250
    VDNLSSLTCE KNPLDIDATG VVGLSFSGHR IQSATVLLNE DVNDTKTAEA 300
    AMQRLKAANI PEQNTIGFMF ACVGRGFQYY RAKGNVEADA FRKFFPNVPL 350
    FGFFGNGEIG CDRIVTGNFI LRRCNEVKEE DLFHSYTTIM ALVHLGASK 399
    Length:399
    Mass (Da):44,009
    Last modified:December 6, 2005 - v1
    Checksum:i7F73BBF1F1FCB90E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06054889 Genomic DNA. No translation available.
    BC107670 mRNA. Translation: AAI07671.1.
    CH473975 Genomic DNA. Translation: EDL95566.1.
    RefSeqiNP_001032859.1. NM_001037770.1.
    UniGeneiRn.4284.

    Genome annotation databases

    EnsembliENSRNOT00000020309; ENSRNOP00000020309; ENSRNOG00000022702.
    GeneIDi300724.
    KEGGirno:300724.
    UCSCiRGD:1306664. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06054889 Genomic DNA. No translation available.
    BC107670 mRNA. Translation: AAI07671.1 .
    CH473975 Genomic DNA. Translation: EDL95566.1 .
    RefSeqi NP_001032859.1. NM_001037770.1.
    UniGenei Rn.4284.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000020309.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000020309 ; ENSRNOP00000020309 ; ENSRNOG00000022702 .
    GeneIDi 300724.
    KEGGi rno:300724.
    UCSCi RGD:1306664. rat.

    Organism-specific databases

    CTDi 26263.
    RGDi 1306664. Fbxo22.

    Phylogenomic databases

    eggNOGi NOG26261.
    GeneTreei ENSGT00390000013049.
    HOGENOMi HOG000285967.
    HOVERGENi HBG051570.
    InParanoidi Q32Q88.
    KOi K10302.
    OMAi CCKVGAS.
    OrthoDBi EOG72G17J.
    TreeFami TF328809.

    Miscellaneous databases

    NextBioi 647386.
    PROi Q32Q88.

    Gene expression databases

    Genevestigatori Q32Q88.

    Family and domain databases

    InterProi IPR001810. F-box_dom.
    IPR019494. FIST_C_domain.
    [Graphical view ]
    Pfami PF00646. F-box. 1 hit.
    PF10442. FIST_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81383. SSF81383. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: ProstateImported.
    2. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    5. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiQ32Q88_RAT
    AccessioniPrimary (citable) accession number: Q32Q88
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 6, 2005
    Last sequence update: December 6, 2005
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3