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Q32PZ5

- Q32PZ5_RAT

UniProt

Q32PZ5 - Q32PZ5_RAT

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Protein
Submitted name: Ctr9 protein
Gene
Ctr9, Sh2bp1
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. JAK-STAT cascade Source: Ensembl
  2. cellular response to lipopolysaccharide Source: Ensembl
  3. endodermal cell fate commitment Source: Ensembl
  4. histone H2B ubiquitination Source: Ensembl
  5. histone H3-K4 trimethylation Source: Ensembl
  6. histone monoubiquitination Source: Ensembl
  7. interleukin-6-mediated signaling pathway Source: Ensembl
  8. negative regulation of myeloid cell differentiation Source: Ensembl
  9. negative regulation of transcription from RNA polymerase II promoter Source: Ensembl
  10. positive regulation of histone H3-K4 methylation Source: Ensembl
  11. positive regulation of histone H3-K79 methylation Source: Ensembl
  12. positive regulation of transcription elongation from RNA polymerase II promoter Source: Ensembl
  13. positive regulation of transcription from RNA polymerase II promoter Source: Ensembl
  14. stem cell maintenance Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ctr9 proteinImported
Gene namesi
Name:Ctr9Imported
Synonyms:Sh2bp1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1311097. Ctr9.

Subcellular locationi

GO - Cellular componenti

  1. Cdc73/Paf1 complex Source: Ensembl
  2. transcriptionally active chromatin Source: Ensembl
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ32PZ5.

PTM databases

PhosphoSiteiQ32PZ5.

Expressioni

Gene expression databases

GenevestigatoriQ32PZ5.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000023741.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0457.
HOGENOMiHOG000246926.
InParanoidiQ32PZ5.
PhylomeDBiQ32PZ5.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical.
IPR001440. TPR_1.
[Graphical view]
PfamiPF00515. TPR_1. 1 hit.
[Graphical view]
PROSITEiPS50293. TPR_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q32PZ5-1 [UniParc]FASTAAdd to Basket

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SDVWLNLAHI YVEQKQYISA VQMYENCLRK FYKHQNTEVV LYLARALFKC    50
GKLQECKQTL LKARHVAPSD TVLMFNVALV LQRLATSVLK DEKSNLKEVL 100
NAVKELELAH RYFSYLSKVG DKMRFDLALA ASEARQCSDL LSQAQYHVAR 150
ARKQDEEERE LRAKQEQEKE LLRQKLLKEQ EEKRLREKEE QKKLLEQRAQ 200
YVEKTKNILM FTGETEATKE KKRGGGGGRR SKKGGEFDEF VNDDTDDDLP 250
ISKKKKKRKG SGSEQEGEEE EGGERKKKRR RRPPKGEEGS DDDETENGPK 300
PKKRRPPRAE KKKAPKPERL PPSMKGKIKS KAIISSSDDS SDEDKLKIAD 350
EGHPRNSNSD SDDDERPNRR ASSESDSDDN QNKSGSEAGS PRRSGRQESD 400
EDSDSDQPSR KRRRSGSEQS DNESAQSGRS PSGGSENEND SRPVSPSAES 450
DHESEQGSDN EGSGQGSGNE SEPEGSNNEA SDRGSEHGSD DSD 493
Length:493
Mass (Da):55,534
Last modified:December 6, 2005 - v1
Checksum:i045234A8C7056A83
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC107916 mRNA. Translation: AAI07917.1.
UniGeneiRn.102000.

Genome annotation databases

UCSCiRGD:1311097. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC107916 mRNA. Translation: AAI07917.1 .
UniGenei Rn.102000.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000023741.

PTM databases

PhosphoSitei Q32PZ5.

Proteomic databases

PaxDbi Q32PZ5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi RGD:1311097. rat.

Organism-specific databases

RGDi 1311097. Ctr9.

Phylogenomic databases

eggNOGi COG0457.
HOGENOMi HOG000246926.
InParanoidi Q32PZ5.
PhylomeDBi Q32PZ5.

Gene expression databases

Genevestigatori Q32PZ5.

Family and domain databases

Gene3Di 1.25.40.10. 1 hit.
InterProi IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical.
IPR001440. TPR_1.
[Graphical view ]
Pfami PF00515. TPR_1. 1 hit.
[Graphical view ]
PROSITEi PS50293. TPR_REGION. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: PlacentaImported.

Entry informationi

Entry nameiQ32PZ5_RAT
AccessioniPrimary (citable) accession number: Q32PZ5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: July 9, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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