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Protein

Prolyl 3-hydroxylase 1

Gene

LEPRE1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Basement membrane-associated chondroitin sulfate proteoglycan (CSPG). Has prolyl 3-hydroxylase activity catalyzing the post-translational formation of 3-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens, especially types IV and V. May be involved in the secretory pathway of cells. Has growth suppressive activity in fibroblasts.1 Publication

Catalytic activityi

L-proline-[procollagen] + 2-oxoglutarate + O2 = trans-3-hydroxy-L-proline-[procollagen] + succinate + CO2.

Cofactori

Protein has several cofactor binding sites:

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi587 – 5871Iron
Metal bindingi589 – 5891Iron
Metal bindingi659 – 6591Iron
Active sitei669 – 6691By similarity

GO - Molecular functioni

  • iron ion binding Source: InterPro
  • L-ascorbic acid binding Source: UniProtKB-KW
  • procollagen-proline 3-dioxygenase activity Source: UniProtKB
  • protein complex binding Source: UniProtKB

GO - Biological processi

  • bone development Source: UniProtKB
  • cell growth Source: Ensembl
  • chaperone-mediated protein folding Source: UniProtKB
  • collagen fibril organization Source: Ensembl
  • collagen metabolic process Source: UniProtKB
  • extracellular matrix organization Source: Reactome
  • negative regulation of cell proliferation Source: UniProtKB
  • negative regulation of post-translational protein modification Source: UniProtKB
  • peptidyl-proline hydroxylation Source: GOC
  • protein folding Source: UniProtKB
  • protein hydroxylation Source: UniProtKB
  • protein stabilization Source: UniProtKB
  • regulation of ossification Source: Ensembl
  • regulation of protein secretion Source: UniProtKB
Complete GO annotation...

Keywords - Molecular functioni

Dioxygenase, Oxidoreductase

Keywords - Ligandi

Iron, Metal-binding, Vitamin C

Enzyme and pathway databases

BRENDAi1.14.11.28. 2681.
1.14.11.7. 2681.
ReactomeiREACT_121139. Collagen biosynthesis and modifying enzymes.

Names & Taxonomyi

Protein namesi
Recommended name:
Prolyl 3-hydroxylase 1 (EC:1.14.11.7)
Alternative name(s):
Growth suppressor 1
Leucine- and proline-enriched proteoglycan 1
Short name:
Leprecan-1
Gene namesi
Name:LEPRE1
Synonyms:GROS1, P3H1
ORF Names:PSEC0109
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 1

Organism-specific databases

HGNCiHGNC:19316. LEPRE1.

Subcellular locationi

GO - Cellular componenti

  • endoplasmic reticulum Source: UniProtKB
  • endoplasmic reticulum lumen Source: Reactome
  • extracellular exosome Source: UniProtKB
  • macromolecular complex Source: UniProtKB
  • membrane Source: UniProtKB
  • nucleus Source: Ensembl
  • proteinaceous extracellular matrix Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Extracellular matrix, Secreted

Pathology & Biotechi

Involvement in diseasei

Osteogenesis imperfecta 8 (OI8)2 Publications

The disease is caused by mutations affecting the gene represented in this entry. A splice site mutation leading to the absence of isoform 1 has been reported in 2 OI8 patients. Isoform 1 is the only form predicted to be located in the endoplasmic reticulum, which the appropriate location for the catalysis of collagen hydroxylation. These patients show indeed severely reduced COL1A1 hydroxylation (PubMed:19088120).

Disease descriptionA form of osteogenesis imperfecta, a connective tissue disorder characterized by low bone mass, bone fragility and susceptibility to fractures after minimal trauma. Disease severity ranges from very mild forms without fractures to intrauterine fractures and perinatal lethality. Extraskeletal manifestations, which affect a variable number of patients, are dentinogenesis imperfecta, hearing loss, and blue sclerae. OI8 is characterized by disproportionate short stature, severe osteoporosis, shortening of the long bones, white sclerae, a round face and a short barrel-shaped chest.

See also OMIM:610915

Keywords - Diseasei

Dwarfism, Osteogenesis imperfecta

Organism-specific databases

MIMi610915. phenotype.
Orphaneti216804. Osteogenesis imperfecta type 2.
216812. Osteogenesis imperfecta type 3.
PharmGKBiPA134930599.

Chemistry

DrugBankiDB00172. L-Proline.
DB00139. Succinic acid.
DB00126. Vitamin C.

Polymorphism and mutation databases

BioMutaiLEPRE1.
DMDMi109892809.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence AnalysisAdd
BLAST
Chaini23 – 736714Prolyl 3-hydroxylase 1PRO_0000240352Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi316 – 3161N-linked (GlcNAc...)Sequence Analysis
Glycosylationi467 – 4671N-linked (GlcNAc...)Sequence Analysis
Glycosylationi540 – 5401N-linked (GlcNAc...)1 Publication

Post-translational modificationi

O-glycosylated; chondroitin sulfate.By similarity

Keywords - PTMi

Glycoprotein

Proteomic databases

MaxQBiQ32P28.
PaxDbiQ32P28.
PRIDEiQ32P28.

PTM databases

PhosphoSiteiQ32P28.

Expressioni

Gene expression databases

BgeeiQ32P28.
ExpressionAtlasiQ32P28. baseline and differential.
GenevisibleiQ32P28. HS.

Organism-specific databases

HPAiHPA012113.
HPA016980.

Interactioni

Protein-protein interaction databases

BioGridi122098. 54 interactions.
IntActiQ32P28. 7 interactions.
MINTiMINT-4537432.
STRINGi9606.ENSP00000296388.

Structurei

3D structure databases

ProteinModelPortaliQ32P28.
SMRiQ32P28. Positions 150-183, 311-342.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati35 – 6834TPR 1Add
BLAST
Repeati143 – 17634TPR 2Add
BLAST
Repeati205 – 23834TPR 3Add
BLAST
Repeati301 – 33434TPR 4Add
BLAST
Domaini564 – 678115Fe2OG dioxygenasePROSITE-ProRule annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili401 – 43939Sequence AnalysisAdd
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi733 – 7364Prevents secretion from ERPROSITE-ProRule annotation

Sequence similaritiesi

Belongs to the leprecan family.Curated
Contains 1 Fe2OG dioxygenase domain.PROSITE-ProRule annotation
Contains 4 TPR repeats.Curated

Keywords - Domaini

Coiled coil, Repeat, Signal, TPR repeat

Phylogenomic databases

eggNOGiNOG269251.
GeneTreeiENSGT00550000074573.
HOVERGENiHBG053224.
InParanoidiQ32P28.
KOiK08134.
OMAiFNYLQFS.
OrthoDBiEOG7BZVSS.
PhylomeDBiQ32P28.
TreeFamiTF320837.

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
InterProiIPR005123. Oxoglu/Fe-dep_dioxygenase.
IPR006620. Pro_4_hyd_alph.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PfamiPF13640. 2OG-FeII_Oxy_3. 1 hit.
[Graphical view]
SMARTiSM00702. P4Hc. 1 hit.
[Graphical view]
PROSITEiPS00014. ER_TARGET. 1 hit.
PS51471. FE2OG_OXY. 1 hit.
[Graphical view]

Sequences (4)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 4 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q32P28-1) [UniParc]FASTAAdd to basket

Also known as: GROS1-L, LEPREa, P3H1a

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MAVRALKLLT TLLAVVAAAS QAEVESEAGW GMVTPDLLFA EGTAAYARGD
60 70 80 90 100
WPGVVLSMER ALRSRAALRA LRLRCRTQCA ADFPWELDPD WSPSPAQASG
110 120 130 140 150
AAALRDLSFF GGLLRRAACL RRCLGPPAAH SLSEEMELEF RKRSPYNYLQ
160 170 180 190 200
VAYFKINKLE KAVAAAHTFF VGNPEHMEMQ QNLDYYQTMS GVKEADFKDL
210 220 230 240 250
ETQPHMQEFR LGVRLYSEEQ PQEAVPHLEA ALQEYFVAYE ECRALCEGPY
260 270 280 290 300
DYDGYNYLEY NADLFQAITD HYIQVLNCKQ NCVTELASHP SREKPFEDFL
310 320 330 340 350
PSHYNYLQFA YYNIGNYTQA VECAKTYLLF FPNDEVMNQN LAYYAAMLGE
360 370 380 390 400
EHTRSIGPRE SAKEYRQRSL LEKELLFFAY DVFGIPFVDP DSWTPEEVIP
410 420 430 440 450
KRLQEKQKSE RETAVRISQE IGNLMKEIET LVEEKTKESL DVSRLTREGG
460 470 480 490 500
PLLYEGISLT MNSKLLNGSQ RVVMDGVISD HECQELQRLT NVAATSGDGY
510 520 530 540 550
RGQTSPHTPN EKFYGVTVFK ALKLGQEGKV PLQSAHLYYN VTEKVRRIME
560 570 580 590 600
SYFRLDTPLY FSYSHLVCRT AIEEVQAERK DDSHPVHVDN CILNAETLVC
610 620 630 640 650
VKEPPAYTFR DYSAILYLNG DFDGGNFYFT ELDAKTVTAE VQPQCGRAVG
660 670 680 690 700
FSSGTENPHG VKAVTRGQRC AIALWFTLDP RHSERDRVQA DDLVKMLFSP
710 720 730
EEMDLSQEQP LDAQQGPPEP AQESLSGSES KPKDEL
Length:736
Mass (Da):83,394
Last modified:June 27, 2006 - v2
Checksum:iEA1909828FAE685E
GO
Isoform 2 (identifier: Q32P28-2) [UniParc]FASTAAdd to basket

Also known as: GROS1-S

The sequence of this isoform differs from the canonical sequence as follows:
     361-363: SAK → QGT
     364-736: Missing.

Show »
Length:363
Mass (Da):41,215
Checksum:i5B1837D6923D9C4A
GO
Isoform 3 (identifier: Q32P28-3) [UniParc]FASTAAdd to basket

Also known as: LEPREc

The sequence of this isoform differs from the canonical sequence as follows:
     686-736: DRVQADDLVK...GSESKPKDEL → VRAARAGESS...NLPCPLGSSS

Note: No experimental confirmation available.
Show »
Length:804
Mass (Da):90,616
Checksum:iDF635702F430A113
GO
Isoform 4 (identifier: Q32P28-4) [UniParc]FASTAAdd to basket

Also known as: LEPREb, P3H1b

The sequence of this isoform differs from the canonical sequence as follows:
     686-736: DRVQADDLVKMLFSPEEMDLSQEQPLDAQQGPPEPAQESLSGSESKPKDEL → VRAARAGQGAGR

Show »
Length:697
Mass (Da):78,922
Checksum:iDF642E0B7E26E7F3
GO

Sequence cautioni

The sequence AAH15309.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated
The sequence BAB15256.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti102 – 1021A → G in AAG31018 (PubMed:10951563).Curated
Sequence conflicti102 – 1021A → G in AAG31019 (PubMed:10951563).Curated
Sequence conflicti321 – 3211V → G in AAG31018 (PubMed:10951563).Curated
Sequence conflicti321 – 3211V → G in AAG31019 (PubMed:10951563).Curated
Sequence conflicti396 – 3961E → G in BAB55264 (PubMed:14702039).Curated
Sequence conflicti469 – 4691S → Y in AAG31019 (PubMed:10951563).Curated
Sequence conflicti605 – 6051P → L in BAB15256 (PubMed:14702039).Curated
Sequence conflicti711 – 7111L → M in BAB55291 (PubMed:14702039).Curated

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti349 – 3491G → R.
Corresponds to variant rs6700677 [ dbSNP | Ensembl ].
VAR_033252
Natural varianti506 – 5061P → R.
Corresponds to variant rs3738501 [ dbSNP | Ensembl ].
VAR_033253
Natural varianti549 – 5491M → I.
Corresponds to variant rs11581921 [ dbSNP | Ensembl ].
VAR_033254
Natural varianti644 – 6441Q → K.
Corresponds to variant rs3738497 [ dbSNP | Ensembl ].
VAR_050442

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei361 – 3633SAK → QGT in isoform 2. 1 PublicationVSP_019346
Alternative sequencei364 – 736373Missing in isoform 2. 1 PublicationVSP_019347Add
BLAST
Alternative sequencei686 – 73651DRVQA…PKDEL → VRAARAGESSWCCGDPFPER PWFAFLFPKSHCQWLRHERS TWDTSSNALSLWSHCLVLPG PAVNGIQVGKEVKTGSDAEF LVPSLGPTSAVLFQRVGPAG KEMSLGPLRNLPCPLGSSS in isoform 3. 1 PublicationVSP_019348Add
BLAST
Alternative sequencei686 – 73651DRVQA…PKDEL → VRAARAGQGAGR in isoform 4. 1 PublicationVSP_054864Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF097431 mRNA. Translation: AAG31018.1.
AF097432 mRNA. Translation: AAG31019.1.
AK025841 mRNA. Translation: BAB15256.1. Different initiation.
AK027648 mRNA. Translation: BAB55264.1.
AK027680 mRNA. Translation: BAB55291.1.
AK027697 mRNA. Translation: BAB55305.1.
AK075418 mRNA. Translation: BAC11608.1.
BC015309 mRNA. Translation: AAH15309.2. Different initiation.
BC108311 mRNA. Translation: AAI08312.1.
BT007039 mRNA. Translation: AAP35688.1.
CCDSiCCDS472.2. [Q32P28-1]
CCDS53307.1. [Q32P28-4]
CCDS57986.1. [Q32P28-3]
RefSeqiNP_001139761.1. NM_001146289.1. [Q32P28-4]
NP_001230175.1. NM_001243246.1. [Q32P28-3]
NP_071751.3. NM_022356.3. [Q32P28-1]
UniGeneiHs.720014.

Genome annotation databases

EnsembliENST00000236040; ENSP00000236040; ENSG00000117385. [Q32P28-3]
ENST00000296388; ENSP00000296388; ENSG00000117385.
ENST00000397054; ENSP00000380245; ENSG00000117385. [Q32P28-4]
GeneIDi64175.
KEGGihsa:64175.
UCSCiuc001chv.2. human. [Q32P28-1]
uc001chw.2. human. [Q32P28-3]
uc001chy.4. human. [Q32P28-2]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Web resourcesi

Osteogenesis imperfecta variant database

Prolyl 3-hydroxylase 1 (LEPRE1)

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF097431 mRNA. Translation: AAG31018.1.
AF097432 mRNA. Translation: AAG31019.1.
AK025841 mRNA. Translation: BAB15256.1. Different initiation.
AK027648 mRNA. Translation: BAB55264.1.
AK027680 mRNA. Translation: BAB55291.1.
AK027697 mRNA. Translation: BAB55305.1.
AK075418 mRNA. Translation: BAC11608.1.
BC015309 mRNA. Translation: AAH15309.2. Different initiation.
BC108311 mRNA. Translation: AAI08312.1.
BT007039 mRNA. Translation: AAP35688.1.
CCDSiCCDS472.2. [Q32P28-1]
CCDS53307.1. [Q32P28-4]
CCDS57986.1. [Q32P28-3]
RefSeqiNP_001139761.1. NM_001146289.1. [Q32P28-4]
NP_001230175.1. NM_001243246.1. [Q32P28-3]
NP_071751.3. NM_022356.3. [Q32P28-1]
UniGeneiHs.720014.

3D structure databases

ProteinModelPortaliQ32P28.
SMRiQ32P28. Positions 150-183, 311-342.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi122098. 54 interactions.
IntActiQ32P28. 7 interactions.
MINTiMINT-4537432.
STRINGi9606.ENSP00000296388.

Chemistry

DrugBankiDB00172. L-Proline.
DB00139. Succinic acid.
DB00126. Vitamin C.

PTM databases

PhosphoSiteiQ32P28.

Polymorphism and mutation databases

BioMutaiLEPRE1.
DMDMi109892809.

Proteomic databases

MaxQBiQ32P28.
PaxDbiQ32P28.
PRIDEiQ32P28.

Protocols and materials databases

DNASUi64175.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000236040; ENSP00000236040; ENSG00000117385. [Q32P28-3]
ENST00000296388; ENSP00000296388; ENSG00000117385.
ENST00000397054; ENSP00000380245; ENSG00000117385. [Q32P28-4]
GeneIDi64175.
KEGGihsa:64175.
UCSCiuc001chv.2. human. [Q32P28-1]
uc001chw.2. human. [Q32P28-3]
uc001chy.4. human. [Q32P28-2]

Organism-specific databases

CTDi64175.
GeneCardsiGC01M043185.
HGNCiHGNC:19316. LEPRE1.
HPAiHPA012113.
HPA016980.
MIMi610339. gene.
610915. phenotype.
neXtProtiNX_Q32P28.
Orphaneti216804. Osteogenesis imperfecta type 2.
216812. Osteogenesis imperfecta type 3.
PharmGKBiPA134930599.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG269251.
GeneTreeiENSGT00550000074573.
HOVERGENiHBG053224.
InParanoidiQ32P28.
KOiK08134.
OMAiFNYLQFS.
OrthoDBiEOG7BZVSS.
PhylomeDBiQ32P28.
TreeFamiTF320837.

Enzyme and pathway databases

BRENDAi1.14.11.28. 2681.
1.14.11.7. 2681.
ReactomeiREACT_121139. Collagen biosynthesis and modifying enzymes.

Miscellaneous databases

ChiTaRSiLEPRE1. human.
GenomeRNAii64175.
NextBioi66095.
PROiQ32P28.
SOURCEiSearch...

Gene expression databases

BgeeiQ32P28.
ExpressionAtlasiQ32P28. baseline and differential.
GenevisibleiQ32P28. HS.

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
InterProiIPR005123. Oxoglu/Fe-dep_dioxygenase.
IPR006620. Pro_4_hyd_alph.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PfamiPF13640. 2OG-FeII_Oxy_3. 1 hit.
[Graphical view]
SMARTiSM00702. P4Hc. 1 hit.
[Graphical view]
PROSITEiPS00014. ER_TARGET. 1 hit.
PS51471. FE2OG_OXY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Gros1, a potential growth suppressor on chromosome 1: its identity to basement membrane-associated proteoglycan, leprecan."
    Kaul S.C., Sugihara T., Yoshida A., Nomura H., Wadhwa R.
    Oncogene 19:3576-3583(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), FUNCTION.
    Tissue: Testis.
  2. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3).
    Tissue: Epithelium and Teratocarcinoma.
  3. "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries."
    Otsuki T., Ota T., Nishikawa T., Hayashi K., Suzuki Y., Yamamoto J., Wakamatsu A., Kimura K., Sakamoto K., Hatano N., Kawai Y., Ishii S., Saito K., Kojima S., Sugiyama T., Ono T., Okano K., Yoshikawa Y.
    , Aotsuka S., Sasaki N., Hattori A., Okumura K., Nagai K., Sugano S., Isogai T.
    DNA Res. 12:117-126(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Tissue: Teratocarcinoma.
  4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 4).
    Tissue: Duodenum and Testis.
  5. "Cloning of human full-length CDSs in BD Creator(TM) system donor vector."
    Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A.
    Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 347-736 (ISOFORM 1).
  6. "Prolyl 3-hydroxylase 1 deficiency causes a recessive metabolic bone disorder resembling lethal/severe osteogenesis imperfecta."
    Cabral W.A., Chang W., Barnes A.M., Weis M., Scott M.A., Leikin S., Makareeva E., Kuznetsova N.V., Rosenbaum K.N., Tifft C.J., Bulas D.I., Kozma C., Smith P.A., Eyre D.R., Marini J.C.
    Nat. Genet. 39:359-365(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: INVOLVEMENT IN OI8.
  7. "Recessive osteogenesis imperfecta caused by LEPRE1 mutations: clinical documentation and identification of the splice form responsible for prolyl 3-hydroxylation."
    Willaert A., Malfait F., Symoens S., Gevaert K., Kayserili H., Megarbane A., Mortier G., Leroy J.G., Coucke P.J., De Paepe A.
    J. Med. Genet. 46:233-241(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: INVOLVEMENT IN OI8, SUBCELLULAR LOCATION, ALTERNATIVE SPLICING (ISOFORMS 1; 3 AND 4).
  8. "Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry."
    Chen R., Jiang X., Sun D., Han G., Wang F., Ye M., Wang L., Zou H.
    J. Proteome Res. 8:651-661(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-540.
    Tissue: Liver.
  9. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiP3H1_HUMAN
AccessioniPrimary (citable) accession number: Q32P28
Secondary accession number(s): Q7KZR4
, Q96BR8, Q96SK8, Q96SL5, Q96SN3, Q9H6K3, Q9HC86, Q9HC87
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: June 27, 2006
Last modified: July 22, 2015
This is version 107 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.