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Protein

Rab-like protein 3

Gene

RABL3

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi13 – 20GTPBy similarity8
Nucleotide bindingi66 – 70GTPBy similarity5
Nucleotide bindingi147 – 150GTPBy similarity4

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

GTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Rab-like protein 3
Gene namesi
Name:RABL3
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Unplaced

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003121651 – 236Rab-like protein 3Add BLAST236

Proteomic databases

PaxDbiQ32LJ6.
PRIDEiQ32LJ6.

Expressioni

Gene expression databases

BgeeiENSBTAG00000015898.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000021130.

Structurei

3D structure databases

ProteinModelPortaliQ32LJ6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni1 – 236Small GTPase-likeAdd BLAST236

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiENOG410IJY5. Eukaryota.
ENOG410YR8H. LUCA.
HOGENOMiHOG000006785.
HOVERGENiHBG108392.
InParanoidiQ32LJ6.
KOiK07933.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR013684. MIRO-like.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF08477. Roc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q32LJ6-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MASLDRVKVL VLGDSGVGKS SLVHLLCQNQ VLGNPSWTVG CSVDVRVHDY
60 70 80 90 100
KEGTPEEKTY YIELWDVGGS VGSASSVKST RAVFYNSVNG IILVHDLTNK
110 120 130 140 150
KSSQNLYRWS LEALNRDLVP TGVLVTNGDY DREQFADNQI PLLVIGTKLD
160 170 180 190 200
QIHENKRHEV LTRTAFLAED FNAEEINLDC TNPRYLAAGS SNAVKLSRFF
210 220 230
DKVIEKRYFL RDGNQIPGFP DRKRFGGGTL KSLHYD
Length:236
Mass (Da):26,383
Last modified:December 4, 2007 - v2
Checksum:i6A8E213D76C7AFE2
GO
Isoform 2 (identifier: Q32LJ6-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     130-236: Missing.

Show »
Length:129
Mass (Da):14,025
Checksum:i26FB3BFC5DF9A17C
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_029722130 – 236Missing in isoform 2. 1 PublicationAdd BLAST107

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFC03080796 Genomic DNA. No translation available.
BC109545 mRNA. Translation: AAI09546.1.
EV660132 mRNA. No translation available.
RefSeqiNP_001070274.2. NM_001076806.3. [Q32LJ6-1]
UniGeneiBt.24443.

Genome annotation databases

GeneIDi505510.
KEGGibta:505510.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFC03080796 Genomic DNA. No translation available.
BC109545 mRNA. Translation: AAI09546.1.
EV660132 mRNA. No translation available.
RefSeqiNP_001070274.2. NM_001076806.3. [Q32LJ6-1]
UniGeneiBt.24443.

3D structure databases

ProteinModelPortaliQ32LJ6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000021130.

Proteomic databases

PaxDbiQ32LJ6.
PRIDEiQ32LJ6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi505510.
KEGGibta:505510.

Organism-specific databases

CTDi285282.

Phylogenomic databases

eggNOGiENOG410IJY5. Eukaryota.
ENOG410YR8H. LUCA.
HOGENOMiHOG000006785.
HOVERGENiHBG108392.
InParanoidiQ32LJ6.
KOiK07933.

Gene expression databases

BgeeiENSBTAG00000015898.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR013684. MIRO-like.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF08477. Roc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRABL3_BOVIN
AccessioniPrimary (citable) accession number: Q32LJ6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: December 4, 2007
Last modified: October 5, 2016
This is version 79 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.