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Q32LC1

- RPP38_BOVIN

UniProt

Q32LC1 - RPP38_BOVIN

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Protein

Ribonuclease P protein subunit p38

Gene

RPP38

Organism
Bos taurus (Bovine)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. RPP38 may associate transiently with RNase P RNA as a factor involved in the transport of H1 RNA to the putative site of its assembly in the cell, the nucleolus (By similarity).By similarity

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

GO - Molecular functioni

  1. ribonuclease P activity Source: UniProtKB-EC

GO - Biological processi

  1. tRNA processing Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

tRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein subunit p38 (EC:3.1.26.5)
Short name:
RNaseP protein p38
Gene namesi
Name:RPP38
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
ProteomesiUP000009136: Unplaced

Subcellular locationi

Nucleusnucleolus Curated

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 282281Ribonuclease P protein subunit p38PRO_0000254030Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanineBy similarity
Modified residuei226 – 2261PhosphoserineBy similarity
Modified residuei235 – 2351PhosphoserineBy similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PRIDEiQ32LC1.

Interactioni

Subunit structurei

RNase P consists of an RNA moiety and at least 8 protein subunits; POP1, RPP14, RPP20/POP7, RPP25, RPP29/POP4, RPP30, RPP38 and RPP40. RPP38 is probably a dimer (By similarity).By similarity

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000010127.

Structurei

3D structure databases

ProteinModelPortaliQ32LC1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L7Ae family.Curated

Phylogenomic databases

eggNOGiNOG308103.
HOGENOMiHOG000231566.
HOVERGENiHBG060241.
InParanoidiQ32LC1.
KOiK14523.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiIPR029064. L30e-like.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q32LC1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAAAPQAPGR GSVRKTRPLP VKTSLNNPYS ICWGVLDRED MHFILQTLED
60 70 80 90 100
RIQSLGLQKI EDRKRKKKQP PLKKQSGDTS SIDVDTGEDL KKEKPKGDAQ
110 120 130 140 150
ASGWTPVDVR KQLAIGINEV TRALERNELL LALACKSAKP AIVTSHLVQL
160 170 180 190 200
SVSRGVRACQ VPRLSERLAP VLGLKCVLAL GFKRNTTAFG EELRAILPRV
210 220 230 240 250
PRLNVAWLQD ALEDPRENLQ TESLESQDEE ILDTSFEDLS KPKRKLAEGQ
260 270 280
QPVVLQPLKI KKLIPNPNKI RKPPKSKRTA SK
Length:282
Mass (Da):31,413
Last modified:December 6, 2005 - v1
Checksum:iCC95672164BAD9F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC109652 mRNA. Translation: AAI09653.1.
RefSeqiNP_001033174.1. NM_001038085.2.
UniGeneiBt.24490.

Genome annotation databases

GeneIDi511723.
KEGGibta:511723.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC109652 mRNA. Translation: AAI09653.1 .
RefSeqi NP_001033174.1. NM_001038085.2.
UniGenei Bt.24490.

3D structure databases

ProteinModelPortali Q32LC1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9913.ENSBTAP00000010127.

Proteomic databases

PRIDEi Q32LC1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 511723.
KEGGi bta:511723.

Organism-specific databases

CTDi 10557.

Phylogenomic databases

eggNOGi NOG308103.
HOGENOMi HOG000231566.
HOVERGENi HBG060241.
InParanoidi Q32LC1.
KOi K14523.

Miscellaneous databases

NextBioi 20870066.

Family and domain databases

Gene3Di 3.30.1330.30. 1 hit.
InterProi IPR029064. L30e-like.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view ]
Pfami PF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view ]
SUPFAMi SSF55315. SSF55315. 1 hit.
ProtoNeti Search...

Publicationsi

  1. NIH - Mammalian Gene Collection (MGC) project
    Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: Crossbred X Angus.
    Tissue: Liver.

Entry informationi

Entry nameiRPP38_BOVIN
AccessioniPrimary (citable) accession number: Q32LC1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: December 6, 2005
Last modified: October 29, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3