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Q32LC1

- RPP38_BOVIN

UniProt

Q32LC1 - RPP38_BOVIN

Protein

Ribonuclease P protein subunit p38

Gene

RPP38

Organism
Bos taurus (Bovine)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (06 Dec 2005)
      Previous versions | rss
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    Functioni

    Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. RPP38 may associate transiently with RNase P RNA as a factor involved in the transport of H1 RNA to the putative site of its assembly in the cell, the nucleolus By similarity.By similarity

    Catalytic activityi

    Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

    GO - Molecular functioni

    1. ribonuclease P activity Source: UniProtKB-EC

    GO - Biological processi

    1. tRNA processing Source: UniProtKB-KW

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    tRNA processing

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribonuclease P protein subunit p38 (EC:3.1.26.5)
    Short name:
    RNaseP protein p38
    Gene namesi
    Name:RPP38
    OrganismiBos taurus (Bovine)
    Taxonomic identifieri9913 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
    ProteomesiUP000009136: Unplaced

    Subcellular locationi

    Nucleusnucleolus Curated

    GO - Cellular componenti

    1. nucleolus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 282281Ribonuclease P protein subunit p38PRO_0000254030Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei2 – 21N-acetylalanineBy similarity
    Modified residuei226 – 2261PhosphoserineBy similarity
    Modified residuei235 – 2351PhosphoserineBy similarity

    Keywords - PTMi

    Acetylation, Phosphoprotein

    Proteomic databases

    PRIDEiQ32LC1.

    Interactioni

    Subunit structurei

    RNase P consists of an RNA moiety and at least 8 protein subunits; POP1, RPP14, RPP20/POP7, RPP25, RPP29/POP4, RPP30, RPP38 and RPP40. RPP38 is probably a dimer By similarity.By similarity

    Protein-protein interaction databases

    STRINGi9913.ENSBTAP00000010127.

    Structurei

    3D structure databases

    ProteinModelPortaliQ32LC1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L7Ae family.Curated

    Phylogenomic databases

    eggNOGiNOG308103.
    HOGENOMiHOG000231566.
    HOVERGENiHBG060241.
    InParanoidiQ32LC1.
    KOiK14523.

    Family and domain databases

    Gene3Di3.30.1330.30. 1 hit.
    InterProiIPR029064. L30e-like.
    IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
    [Graphical view]
    PfamiPF01248. Ribosomal_L7Ae. 1 hit.
    [Graphical view]
    SUPFAMiSSF55315. SSF55315. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q32LC1-1 [UniParc]FASTAAdd to Basket

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    MAAAPQAPGR GSVRKTRPLP VKTSLNNPYS ICWGVLDRED MHFILQTLED    50
    RIQSLGLQKI EDRKRKKKQP PLKKQSGDTS SIDVDTGEDL KKEKPKGDAQ 100
    ASGWTPVDVR KQLAIGINEV TRALERNELL LALACKSAKP AIVTSHLVQL 150
    SVSRGVRACQ VPRLSERLAP VLGLKCVLAL GFKRNTTAFG EELRAILPRV 200
    PRLNVAWLQD ALEDPRENLQ TESLESQDEE ILDTSFEDLS KPKRKLAEGQ 250
    QPVVLQPLKI KKLIPNPNKI RKPPKSKRTA SK 282
    Length:282
    Mass (Da):31,413
    Last modified:December 6, 2005 - v1
    Checksum:iCC95672164BAD9F5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC109652 mRNA. Translation: AAI09653.1.
    RefSeqiNP_001033174.1. NM_001038085.2.
    UniGeneiBt.24490.

    Genome annotation databases

    GeneIDi511723.
    KEGGibta:511723.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC109652 mRNA. Translation: AAI09653.1 .
    RefSeqi NP_001033174.1. NM_001038085.2.
    UniGenei Bt.24490.

    3D structure databases

    ProteinModelPortali Q32LC1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 9913.ENSBTAP00000010127.

    Proteomic databases

    PRIDEi Q32LC1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 511723.
    KEGGi bta:511723.

    Organism-specific databases

    CTDi 10557.

    Phylogenomic databases

    eggNOGi NOG308103.
    HOGENOMi HOG000231566.
    HOVERGENi HBG060241.
    InParanoidi Q32LC1.
    KOi K14523.

    Miscellaneous databases

    NextBioi 20870066.

    Family and domain databases

    Gene3Di 3.30.1330.30. 1 hit.
    InterProi IPR029064. L30e-like.
    IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
    [Graphical view ]
    Pfami PF01248. Ribosomal_L7Ae. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55315. SSF55315. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. NIH - Mammalian Gene Collection (MGC) project
      Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: Crossbred X Angus.
      Tissue: Liver.

    Entry informationi

    Entry nameiRPP38_BOVIN
    AccessioniPrimary (citable) accession number: Q32LC1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 31, 2006
    Last sequence update: December 6, 2005
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3