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Q32AZ6 (Q32AZ6_SHIDS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gadA EMBL ABB63509.1
Ordered Locus Names:SDY_3532 EMBL ABB63509.1
OrganismShigella dysenteriae serotype 1 (strain Sd197) [Reference proteome] [HAMAP] EMBL ABB63509.1
Taxonomic identifier300267 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q32AZ6 [UniParc].

Last modified December 6, 2005. Version 1.
Checksum: 794788AEE7F9A6E5

FASTA46452,401
        10         20         30         40         50         60 
MAFRVLTMAV DLCRLTTRTM NVNAGHERTS KARIIHQIQL IRGITDELYL DGNARQNLAT 

        70         80         90        100        110        120 
FCQTWDDENV HKFMDLSINK NWIDKEEYPQ SAAIDLRCVN MVADLWHAPA PKNGQAVGTN 

       130        140        150        160        170        180 
TIGSSEACML GGMAMKWRWR KRMEAAGKPT DKPNLVCGPV QICWHKFARY WDVELREIPM 

       190        200        210        220        230        240 
RPGQLFMDPK RMIEACDENT IGVVPTFGVT YTGNYEFPQP LHDALDKFQA DTGIDIDMHI 

       250        260        270        280        290        300 
DAASGGFLAP FVAPDIVWDF RLPRVKSISA SGHKFGLAPL GCGWVIWRDE EALPQELVFN 

       310        320        330        340        350        360 
VDYLGGQIGT FAINFSRPAG QVIAQYYEFL RLGREGYTKV QNASYQVAAY LADEIAKLGP 

       370        380        390        400        410        420 
YEFICTGRPD EGIPAVCFKL KDGEDPGYTL YNLSERLRLR GWQVPAFTLG GEATDIVVMR 

       430        440        450        460 
IMCRRGFEMD FAELLLEDYK ASLKYLSDHP KLQGIAQQNS FKHT 

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References

[1]"Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery."
Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J., Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J., Xu J. expand/collapse author list , Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J., Jin Q.
Nucleic Acids Res. 33:6445-6458(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Sd197 EMBL ABB63509.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000034 Genomic DNA. Translation: ABB63509.1.
RefSeqYP_405000.1. NC_007606.1.

3D structure databases

ProteinModelPortalQ32AZ6.
SMRQ32AZ6. Positions 44-464.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING300267.SDY_3532.

Proteomic databases

PaxDbQ32AZ6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB63509; ABB63509; SDY_3532.
GeneID3798133.
KEGGsdy:SDY_3532.
PATRIC18697598. VBIShiDys99784_4187.

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAMIGRLFN.
OrthoDBEOG618QPT.

Enzyme and pathway databases

BioCycSDYS300267:GJEW-3528-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ32AZ6_SHIDS
AccessionPrimary (citable) accession number: Q32AZ6
Entry history
Integrated into UniProtKB/TrEMBL: December 6, 2005
Last sequence update: December 6, 2005
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)