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Protein
Submitted name:

NADH dehydrogenase

Gene

ndhF

Organism
Osteospermum muricatum
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol.SAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationSAAS annotation

Keywords - Ligandi

NADUniRule annotationSAAS annotation, NADPUniRule annotationSAAS annotation, PlastoquinoneUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
NADH dehydrogenaseImported
Gene namesi
Name:ndhFImported
Encoded oniPlastid; ChloroplastImported
OrganismiOsteospermum muricatumImported
Taxonomic identifieri41618 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsAsteralesAsteraceaeAsteroideaeCalenduleaeOsteospermum

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2823HelicalSequence analysisAdd
BLAST
Transmembranei40 – 6021HelicalSequence analysisAdd
BLAST
Transmembranei85 – 10925HelicalSequence analysisAdd
BLAST
Transmembranei121 – 13919HelicalSequence analysisAdd
BLAST
Transmembranei145 – 16622HelicalSequence analysisAdd
BLAST
Transmembranei187 – 20317HelicalSequence analysisAdd
BLAST
Transmembranei223 – 24220HelicalSequence analysisAdd
BLAST
Transmembranei263 – 28725HelicalSequence analysisAdd
BLAST
Transmembranei293 – 31119HelicalSequence analysisAdd
BLAST
Transmembranei327 – 34822HelicalSequence analysisAdd
BLAST
Transmembranei396 – 41722HelicalSequence analysisAdd
BLAST
Transmembranei429 – 45123HelicalSequence analysisAdd
BLAST
Transmembranei544 – 56522HelicalSequence analysisAdd
BLAST
Transmembranei600 – 61819HelicalSequence analysisAdd
BLAST
Transmembranei717 – 73519HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

ChloroplastImported, Membrane, Plastid

PTM / Processingi

Keywords - PTMi

QuinoneUniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini72 – 12958Proton_antipo_NInterPro annotationAdd
BLAST
Domaini141 – 442302Proton_antipo_MInterPro annotationAdd
BLAST
Domaini448 – 684237Proton_antipo_CInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the complex I subunit 5 family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Family and domain databases

InterProiIPR002128. NADH_UbQ_OxRdtase_chlpt_su5_C.
IPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
IPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF01010. Proton_antipo_C. 1 hit.
PF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.

Sequencei

Sequence statusi: Complete.

Q32744-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQTYQYVWI IPFLPLPVPM LIGLGLLLFP TATKSLRRMW AFQSVLLLSI
60 70 80 90 100
VMIFSINLSI QQINSSSVYQ YVWSWIINND FSLEFGYLID PLTSIMSILI
110 120 130 140 150
TTVGILVLIY SDNYMSHDHG YLRFFAYMSF FSTSMLGLVT SSNLIQIYIF
160 170 180 190 200
WELVGICSYL LIGFWFTRPV AAKACQKAFV TNRVGDFGLL LGILGFYWVT
210 220 230 240 250
GTFEFRDLFQ IFNNLISNNE VNFVFVTLCA VLLFAGAIAK SAQFPLHVWL
260 270 280 290 300
PDAMEGPTPI SALIHAATMV AAGIFLVARL MPLFIIIPHI MNFISLIGII
310 320 330 340 350
TVFLGATLAL AQKDIKRGLA YSTMSQLGYM MLALGMGSYR SALFHLITHA
360 370 380 390 400
YSKALLFLGS GSVIHSMETL VGYCPKKSQN MVLMGGLTKH VPITKNSFLL
410 420 430 440 450
GTLSLCGIPP LACFWSKDEI LNDSWLYSPI FAIIAWSTAG LTAFYMCRIY
460 470 480 490 500
LLTFEGHLNV HFQNYSGKSN TPLYSISLWG KEGSKISNKS FRLITLLKNG
510 520 530 540 550
RPSFFSNKVY QIDENVTNWI QPFLSINFGN TKTSLYPYES DNTMLFPILI
560 570 580 590 600
LSLFTLFVGF LGIPFNQDVD ILTKWLTPSI NLLHKNSNNS IDWYEFCKDA
610 620 630 640 650
VFSVSIASFG IFISFFLYKP VYSSFQNLDL INSFVKMGPK RIFYDKIKNA
660 670 680 690 700
IYDWSYNRGY IDAFYGTFFT VGMRKLAEFT HFFDRRIIDG IPNGMGLMSF
710 720 730
FLAEVIKSVG GGRISSYLFF YFSYVSISLL IYYFLNL
Length:737
Mass (Da):83,616
Last modified:November 1, 1996 - v1
Checksum:i4094F77A5EBF750D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39440 Genomic DNA. Translation: AAC37766.1.
PIRiT13504.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39440 Genomic DNA. Translation: AAC37766.1.
PIRiT13504.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR002128. NADH_UbQ_OxRdtase_chlpt_su5_C.
IPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
IPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF01010. Proton_antipo_C. 1 hit.
PF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "ndhF sequence evolution and the major clades in the sunflower family."
    Kim K.J., Jansen R.K.
    Proc. Natl. Acad. Sci. U.S.A. 92:10379-10383(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ32744_9ASTR
AccessioniPrimary (citable) accession number: Q32744
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.